| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 111 [0] | [0] 107 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 105 (1.450) | 43/68 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 111 total aligned reads displayed.
TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTC > NC_000913/2286366‑2286434 | tCACAGCCTGTTTATTTTCTGTTATCAGAACGTcc > 1:948989/1‑35 (MQ=255)tCACAGCCTGTTTATTTTCTGTTATCAGAACGTcc < 1:802429/35‑1 (MQ=255)tCACAGCCTGTTTATTTTCTGTTATCAGAACGTcc > 1:3005637/1‑35 (MQ=255)tCACAGCCTGTTTATTTTCTGTTATCAGAACGTcc > 1:2378633/1‑35 (MQ=255)tCACAGCCTGTTTATTTTCTGTTATCAGAACGTcc > 1:2200291/1‑35 (MQ=255)tCACAGCCTGTTTATTTTCTGTTATCAGAACGTcc > 1:1770326/1‑35 (MQ=255) cacaGCCTGTTTATTTTCTGTTATCAGAACGTCCt < 1:7569894‑M1/35‑2 (MQ=255) cacaGCCTGGTTATTTTCTGTTATCAGAACGTCCt < 1:6048015‑M1/35‑2 (MQ=255) acaGCCTGTTTATTTTCTGTTATCAGAACGTCCtg > 1:2771828‑M1/1‑33 (MQ=255) acaGCCTGTTTATTTTCTGTTATCAGAACGTCCtg > 1:6598234‑M1/1‑33 (MQ=255) aGCCTGTTTATTTTCTGTTATCAGAACGTCCtgag > 1:6352968‑M1/1‑31 (MQ=255) gCCTGTTTATTTTCTGTTATCAGAACGTCCtgagc < 1:35655‑M1/35‑6 (MQ=255) ccTGTTTATTTTCTGTTATCAGAACGTCCtgagct > 1:3253309‑M1/1‑29 (MQ=255) cTGTTTATTTTCTGTTATCAGAACGTCCtgagctt < 1:6782398‑M1/35‑8 (MQ=255) tGTTTATTTTCTGTTATCAGAACGTCCtgagcttt < 1:6192945‑M1/35‑9 (MQ=255) tGTTTATTTTCTGTTATCAGAACGTCCtgagcttt < 1:4332014‑M1/35‑9 (MQ=255) tGTTTATTTTCTGTTATCAGAACGTCCtgagcttt < 1:3850152‑M1/35‑9 (MQ=255) tttATTTTCTGTTATCAGAACGTCCtgagctttca > 1:1824901‑M1/1‑25 (MQ=255) tttATTTTCTGTTATCAGAACGTCCtgagctttca > 1:6032683‑M1/1‑25 (MQ=255) tttATTTTCTGTTATCAGAACGTCCtgagctttca > 1:1397464‑M1/1‑25 (MQ=255) ttATTTTCTGTTATCAGAACGTCCtgagctttcat < 1:6953724‑M1/35‑12 (MQ=255) ttATTTTCTGTTATCAGAACGTCCtgagctttcat < 1:7228045‑M1/35‑12 (MQ=255) ttATTTTCTGTTATCAGAACGTCCtgagctttcat < 1:419943‑M1/35‑12 (MQ=255) tATTTTCTGTTATCAGAACGTCCtgagctttcatc < 1:4085644‑M1/35‑13 (MQ=255) tATTTTCTGTTATCAGAACGTCCtgagctttcatc < 1:7142240‑M1/35‑13 (MQ=255) tATTTTCTGTTATCAGAACGTCCtgagctttcatc < 1:6421306‑M1/35‑13 (MQ=255) aTTTTCTGTTATCAGAACGTCCtgagctttcatcc > 1:2945699‑M1/1‑22 (MQ=255) ttttCTGTTATCAGAACGTCCtgagctttcatcct < 1:2240947‑M1/35‑15 (MQ=255) tttCTGTTATCAGAACGTCCtgagctttcatccta < 1:691787‑M1/35‑16 (MQ=255) tttCTGTTATCAGAACGTCCtgagctttcatccta < 1:6615029‑M1/35‑16 (MQ=255) tttCTGTTATCAGAACGTCCtgagctttcatccta < 1:5562860‑M1/35‑16 (MQ=255) ttCTGTTATCAGAACGTCCtgagctttcatcctat < 1:139533‑M1/35‑17 (MQ=255) ttCTGTTATCAGAACGTCCtgagctttcatcctat > 1:2774220‑M1/1‑19 (MQ=255) ttCTGTTATCAGAACGTCCtgagctttcatcctat < 1:4572400‑M1/35‑17 (MQ=255) ttCTGTTATCAGAACGTCCtgagctttcatcctat > 1:4580673‑M1/1‑19 (MQ=255) ttCTGTTATCAGAACGTCCtgagctttcatcctat > 1:4888560‑M1/1‑19 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatg > 1:3954354‑M1/1‑18 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatg < 1:215293‑M1/35‑18 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatg < 1:4900868‑M1/35‑18 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatg > 1:5566772‑M1/1‑18 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatg < 1:1712168‑M1/35‑18 (MQ=255) cTGTTATCAGAACGTCCtgagctttcatcctatga < 1:1470161‑M1/35‑19 (MQ=255) cTGTTATCAGAACGTCCtgagctttcatcctatga < 1:3764052‑M1/35‑19 (MQ=255) cTGTTATCAGAACGTCCtgagctttcatcctatga < 1:4006433‑M1/35‑19 (MQ=255) tGTTATCAGAACGTCCtgcgctttcatcctatgaa > 1:1646320‑M1/1‑16 (MQ=255) tGTTATCAGAACGTCCtgagctttcatcctatgaa > 1:7790007‑M1/1‑16 (MQ=255) tGTTATCAGAACGTCCtgagctttcatcctatgaa > 1:1393384‑M1/1‑16 (MQ=255) gTTATCAGAACGTCCtgagctttcatcctatgaaa > 1:3028458‑M1/1‑15 (MQ=255) gTTATCAGAACGTCCtgagctttcatcctatgaaa < 1:7334784‑M1/35‑21 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat > 1:7242976‑M1/1‑14 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat < 1:1937374‑M1/35‑22 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat > 1:2120939‑M1/1‑14 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat > 1:2157573‑M1/1‑14 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat > 1:6798357‑M1/1‑14 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat > 1:7762350‑M1/1‑14 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat < 1:3698971‑M1/35‑22 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat < 1:1342878‑M1/35‑22 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaat < 1:4150491‑M1/35‑22 (MQ=255) tATCAGAACGTCCtgagctttcatcctatgaaatt > 1:6427248‑M1/1‑13 (MQ=255) tATCAGAACGTCCtgagctttcatcctatgaaatt < 1:6282682‑M1/35‑23 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaatta > 1:7428419‑M1/1‑12 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaatta > 1:2963905‑M1/1‑12 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaatta > 1:6919408‑M1/1‑12 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaatta < 1:373646‑M1/35‑24 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaatta > 1:6471201‑M1/1‑12 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaatta > 1:2031302‑M1/1‑12 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaatta > 1:2521142‑M1/1‑12 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaa > 1:2393113‑M1/1‑11 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaa > 1:6595934‑M1/1‑11 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaa < 1:3013839‑M1/35‑25 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaa > 1:366438‑M1/1‑11 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaa > 1:3539690‑M1/1‑11 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaa > 1:5058183‑M1/1‑11 (MQ=255) cAGAACGTCCtgagctttcatcctatgaaattaat < 1:1896537‑M1/35‑26 (MQ=255) cAGAACGTCCtgagctttcatcctatgaaattaat < 1:3391870‑M1/35‑26 (MQ=255) aGAACGTCCtgagctttcatcctatgaaattaatt > 1:7808094‑M1/1‑9 (MQ=255) aGAACGTCCtgagctttcatcctatgaaattaatt > 1:7660699‑M1/1‑9 (MQ=255) gAACGTCCtgagctttcatcctatgaaattaattg < 1:5141145‑M1/35‑28 (MQ=255) gAACGTCCtgagctttcatcctatgaaattaattg > 1:3102652‑M1/1‑8 (MQ=255) gAACGTCCtgagctttcatcctatgaaattaattg > 1:2432416‑M1/1‑8 (MQ=255) aaCGTCCtgagctttcatcctatgaaattaattgc > 1:7349542‑M1/1‑7 (MQ=255) aaCGTCCtgagctttcatcctatgaaattaattgc > 1:5602047‑M1/1‑7 (MQ=255) aCGTCCtgagctttcatcctatgaagttaattgct > 1:719709‑M1/1‑6 (MQ=255) aCGTCCtgagctttcatcctatgaaattaattgct < 1:3234109‑M1/35‑30 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:311018‑M1/35‑32 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:7094184‑M1/35‑32 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:5093730‑M1/35‑32 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:1732620‑M1/35‑32 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:7859877‑M1/35‑32 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:3526233‑M1/35‑32 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:5851377‑M1/35‑32 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgt < 1:2330700‑M1/35‑32 (MQ=255) cctgagctttcatcctatgaaattaattgctgtta < 1:2093225‑M1/35‑34 (MQ=255) cctgagctttcatcctatgaaattaattgctgtta < 1:7883759‑M1/35‑34 (MQ=255) cctgagctttcatcctatgaaattaattgctgtta < 1:5036255‑M1/35‑34 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaa > 1:4646573‑M1/1‑1 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaa > 1:7332257‑M1/1‑1 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaa < 1:3502751‑M1/35‑35 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaa < 1:85656‑M1/35‑35 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaa > 1:3770672‑M1/1‑1 (MQ=255) | TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTC > NC_000913/2286366‑2286434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |