| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 111 [0] | [0] 107 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 105 (1.450) | 43/68 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 107 total aligned reads displayed.
AACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAA > NC_000913/2290147‑2290215 | cacagcctgtttattttctgttatcagaacgtcct < 1:7569894‑M2/1‑1 (MQ=255)cacagcctggttattttctgttatcagaacgtcct < 1:6048015‑M2/1‑1 (MQ=255) acagcctgtttattttctgttatcagaacgtccTg > 1:6598234‑M2/34‑35 (MQ=255) acagcctgtttattttctgttatcagaacgtccTg > 1:2771828‑M2/34‑35 (MQ=255) agcctgtttattttctgttatcagaacgtccTGAg > 1:6352968‑M2/32‑35 (MQ=255) gcctgtttattttctgttatcagaacgtccTGAGc < 1:35655‑M2/5‑1 (MQ=255) gcctgtttattttctgttatcagaacgtccTGAGc < 1:7110399‑M2/5‑1 (MQ=255) cctgtttattttctgttatcagaacgtccTGAGCt > 1:3253309‑M2/30‑35 (MQ=255) ctgtttattttctgttatcagaacgtccTGAGCtt < 1:6782398‑M2/7‑1 (MQ=255) tgtttattttctgttatcagaacgtccTGAGCttt < 1:6192945‑M2/8‑1 (MQ=255) tgtttattttctgttatcagaacgtccTGAGCttt < 1:4332014‑M2/8‑1 (MQ=255) tttattttctgttatcagaacgtccTGAGCTTTCa > 1:6032683‑M2/26‑35 (MQ=255) tttattttctgttatcagaacgtccTGAGCTTTCa > 1:1824901‑M2/26‑35 (MQ=255) tttattttctgttatcagaacgtccTGAGCTTTCa > 1:1397464‑M2/26‑35 (MQ=255) tttattttctgttatcagaacgtccTGAGCTTTCa > 1:3512756‑M2/26‑35 (MQ=255) ttattttctgttatcagaacgtccTGAGCTTTCAt < 1:6953724‑M2/11‑1 (MQ=255) ttattttctgttatcagaacgtccTGAGCTTTCAt < 1:419943‑M2/11‑1 (MQ=255) tattttctgttatcagaacgtccTGAGCTTTCATc < 1:4085644‑M2/12‑1 (MQ=255) tattttctgttatcagaacgtccTGAGCTTTCATc < 1:6421306‑M2/12‑1 (MQ=255) tattttctgttatcagaacgtccTGAGCTTTCATc < 1:7142240‑M2/12‑1 (MQ=255) tattttctgttatcagaacgtccTGAGCTTTCATc > 1:1881532‑M2/24‑35 (MQ=255) attttctgttatcagaacgtccTGAGCTTTCATcc > 1:2945699‑M2/23‑35 (MQ=255) ttttctgttatcagaacgtccTGAGCTTTCATCCt < 1:2240947‑M2/14‑1 (MQ=255) tttctgttatcagaacgtccTGAGCTTTCATCCTa < 1:6615029‑M2/15‑1 (MQ=255) tttctgttatcagaacgtccTGAGCTTTCATCCTa < 1:691787‑M2/15‑1 (MQ=255) tttctgttatcagaacgtccTGAGCTTTCATCCTa < 1:5562860‑M2/15‑1 (MQ=255) ttctgttatcagaacgtccTGAGCTTTCATCCTAt < 1:4572400‑M2/16‑1 (MQ=255) ttctgttatcagaacgtccTGAGCTTTCATCCTAt > 1:2774220‑M2/20‑35 (MQ=255) ttctgttatcagaacgtccTGAGCTTTCATCCTAt < 1:139533‑M2/16‑1 (MQ=255) ttctgttatcagaacgtccTGAGCTTTCATCCTAt > 1:4580673‑M2/20‑35 (MQ=255) ttctgttatcagaacgtccTGAGCTTTCATCCTAt > 1:4888560‑M2/20‑35 (MQ=255) tctgttatcagaacgtccTGAGCTTTCATCCTATg > 1:3954354‑M2/19‑35 (MQ=255) tctgttatcagaacgtccTGAGCTTTCATCCTATg < 1:4900868‑M2/17‑1 (MQ=255) tctgttatcagaacgtccTGAGCTTTCATCCTATg > 1:5566772‑M2/19‑35 (MQ=255) tctgttatcagaacgtccTGAGCTTTCATCCTATg < 1:6522360‑M2/17‑1 (MQ=255) tctgttatcagaacgtccTGAGCTTTCATCCTATg < 1:1712168‑M2/17‑1 (MQ=255) ctgttatcagaacgtccTGAGCTTTCATCCTATGa > 1:5644867‑M2/18‑35 (MQ=255) ctgttatcagaacgtccTGAGCTTTCATCCTATGa < 1:1470161‑M2/18‑1 (MQ=255) ctgttatcagaacgtccTGAGCTTTCATCCTATGa < 1:4006433‑M2/18‑1 (MQ=255) ctgttatcagaacgtccTGAGCTTTCATCCTATGa < 1:3764052‑M2/18‑1 (MQ=255) tgttatcagaacgtccTGCGCTTTCATCCTATGaa > 1:1646320‑M2/17‑35 (MQ=255) tgttatcagaacgtccTGAGCTTTCATCCTATGaa > 1:7790007‑M2/17‑35 (MQ=255) tgttatcagaacgtccTGAGCTTTCATCCTATGaa > 1:1393384‑M2/17‑35 (MQ=255) gttatcagaacgtccTGAGCTTTCATCCTATGaaa > 1:3028458‑M2/16‑35 (MQ=255) gttatcagaacgtccTGAGCTTTCATCCTATGaaa < 1:7334784‑M2/20‑1 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat > 1:6798357‑M2/15‑35 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat > 1:7762350‑M2/15‑35 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat > 1:2157573‑M2/15‑35 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat > 1:2120939‑M2/15‑35 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat < 1:1342878‑M2/21‑1 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat < 1:1937374‑M2/21‑1 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat > 1:7242976‑M2/15‑35 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat < 1:4150491‑M2/21‑1 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat < 1:3698971‑M2/21‑1 (MQ=255) ttatcagaacgtccTGAGCTTTCATCCTATGAaat < 1:7609079‑M2/21‑1 (MQ=255) tatcagaacgtccTGAGCTTTCATCCTATGAaatt < 1:6282682‑M2/22‑1 (MQ=255) tatcagaacgtccTGAGCTTTCATCCTATGAaatt > 1:2980658‑M2/14‑35 (MQ=255) atcagaacgtccTGAGCTTTCATCCTATGAaatta > 1:2031302‑M2/13‑35 (MQ=255) atcagaacgtccTGAGCTTTCATCCTATGAaatta > 1:6919408‑M2/13‑35 (MQ=255) atcagaacgtccTGAGCTTTCATCCTATGAaatta > 1:2521142‑M2/13‑35 (MQ=255) atcagaacgtccTGAGCTTTCATCCTATGAaatta > 1:7428419‑M2/13‑35 (MQ=255) atcagaacgtccTGAGCTTTCATCCTATGAaatta > 1:6471201‑M2/13‑35 (MQ=255) atcagaacgtccTGAGCTTTCATCCTATGAaatta > 1:2963905‑M2/13‑35 (MQ=255) atcagaacgtccTGAGCTTTCATCCTATGAaatta < 1:373646‑M2/23‑1 (MQ=255) tcagaacgtccTGAGCTTTCATCCTATGAaattaa < 1:3013839‑M2/24‑1 (MQ=255) tcagaacgtccTGAGCTTTCATCCTATGAaattaa > 1:366438‑M2/12‑35 (MQ=255) tcagaacgtccTGAGCTTTCATCCTATGAaattaa > 1:3539690‑M2/12‑35 (MQ=255) tcagaacgtccTGAGCTTTCATCCTATGAaattaa > 1:2393113‑M2/12‑35 (MQ=255) tcagaacgtccTGAGCTTTCATCCTATGAaattaa > 1:5058183‑M2/12‑35 (MQ=255) tcagaacgtccTGAGCTTTCATCCTATGAaattaa > 1:6595934‑M2/12‑35 (MQ=255) cagaacgtccTGAGCTTTCATCCTATGAaattaat < 1:1896537‑M2/25‑1 (MQ=255) cagaacgtccTGAGCTTTCATCCTATGAaattaat < 1:3391870‑M2/25‑1 (MQ=255) agaacgtccTGAGCTTTCATCCTATGAaattaatt > 1:7808094‑M2/10‑35 (MQ=255) agaacgtccTGAGCTTTCATCCTATGAaattaatt > 1:7660699‑M2/10‑35 (MQ=255) gaacgtccTGAGCTTTCATCCTATGAAATTAATTg > 1:2432416‑M2/9‑35 (MQ=255) gaacgtccTGAGCTTTCATCCTATGAAATTAATTg < 1:5141145‑M2/27‑1 (MQ=255) aacgtccTGAGCTTTCATCCTATGAAATTAATTGc > 1:5602047‑M2/8‑35 (MQ=255) aacgtccTGAGCTTTCATCCTATGAAATTAATTGc > 1:7349542‑M2/8‑35 (MQ=255) acgtccTGAGCTTTCATCCTATGAAGTTAATTGCt > 1:719709‑M2/7‑35 (MQ=255) acgtccTGAGCTTTCATCCTATGAAATTAATTGCt < 1:3234109‑M2/29‑1 (MQ=255) cgtccTGAGCTTTCATCCTATGAAATTAATTGCTg > 1:4883548‑M2/6‑35 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:5093730‑M2/31‑1 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:1732620‑M2/31‑1 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:5851377‑M2/31‑1 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:311018‑M2/31‑1 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:2330700‑M2/31‑1 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:7094184‑M2/31‑1 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:7859877‑M2/31‑1 (MQ=255) gtccTGAGCTTTCATCCTATGAAATTAATTGCTGt < 1:3526233‑M2/31‑1 (MQ=255) ccTGAGCTTTCATCCTATGAAATTAATTGCTGTTa < 1:7883759‑M2/33‑1 (MQ=255) ccTGAGCTTTCATCCTATGAAATTAATTGCTGTTa < 1:2093225‑M2/33‑1 (MQ=255) ccTGAGCTTTCATCCTATGAAATTAATTGCTGTTa < 1:3867454‑M2/33‑1 (MQ=255) cTGAGCTTTCATCCTATGAAATTAATTGCTGTTaa < 1:85656‑M2/34‑1 (MQ=255) cTGAGCTTTCATCCTATGAAATTAATTGCTGTTaa > 1:7332257‑M2/2‑35 (MQ=255) cTGAGCTTTCATCCTATGAAATTAATTGCTGTTaa < 1:2293020‑M2/34‑1 (MQ=255) cTGAGCTTTCATCCTATGAAATTAATTGCTGTTaa > 1:4646573‑M2/2‑35 (MQ=255) cTGAGCTTTCATCCTATGAAATTAATTGCTGTTaa < 1:3502751‑M2/34‑1 (MQ=255) cTGAGCTTTCATCCTATGAAATTAATTGCTGTTaa > 1:3770672‑M2/2‑35 (MQ=255) tGAGCTTTCATCCTATGAAATTAATTGCTGTTaaa < 1:4508702/35‑1 (MQ=255) tGAGCTTTCATCCTATGAAATTAATTGCTGTTaaa > 1:397138/1‑35 (MQ=255) | AACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAA > NC_000913/2290147‑2290215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |