| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 819,776 | Δ62,977 bp | ybhL–deoR | 57 genes ybhL, ybhM, ybhN, clsB, ybhP, ybhQ, ybhR, ybhS, ybhF, ybhG, cecR, rhlE, ybiA, dinG, ybiB, hcxB, ybiJ, ybiI, ybiX, fiu, mcbA, rlmF, ybiO, glnQ, glnP, glnH, dps, rhtA, yliM, ompX, opgE, rybA, mntS, mntR, ybiR, ldtB, ybiT, ybiU, ybiV, ybiW, ybiY, fsaA, moeB, moeA, iaaA, gsiA, gsiB, gsiC, gsiD, pdeI, dgcI, rimO, bssR, yliI, gstB, dacC, deoR |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 819776 | 882752 | 62977 | 93 [0] | [0] 94 | ybhL–deoR | ybhL,ybhM,ybhN,clsB,ybhP,ybhQ,ybhR,ybhS,ybhF,ybhG,cecR,rhlE,ybiA,dinG,ybiB,hcxB,ybiJ,ybiI,ybiX,fiu,mcbA,rlmF,ybiO,glnQ,glnP,glnH,dps,rhtA,yliM,ompX,opgE,rybA,mntS,mntR,ybiR,ldtB,ybiT,ybiU,ybiV,ybiW,ybiY,fsaA,moeB,moeA,iaaA,gsiA,gsiB,gsiC,gsiD,pdeI,dgcI,rimO,bssR,yliI,gstB,dacC,deoR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 819775 | NA (NA) | 92 (1.270) | 43/68 | 0.0 | 100% | noncoding (17/27 nt) | REPt74 | REPt74 |
| ? | NC_000913 | 882753 = | 0 (0.000) | intergenic (‑19/+39) | deoR/ybjG | DNA‑binding transcriptional repressor DeoR/undecaprenyl pyrophosphate phosphatase | |||||
CTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTGCGTCCGGCAATTTCACCGCTCAGTACATACGTT > NC_000913/819741‑819809 | cTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCt > 1:605959/1‑35 (MQ=255) tGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTt < 1:6997168‑M1/35‑2 (MQ=255) tGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTt < 1:6253048‑M1/35‑2 (MQ=255) tGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTt > 1:4704816‑M1/1‑34 (MQ=255) tGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTt < 1:5105691‑M1/35‑2 (MQ=255) ggTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt < 1:6768843‑M1/35‑3 (MQ=255) ggTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt < 1:2819607‑M1/35‑3 (MQ=255) ggTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt > 1:7018717‑M1/1‑33 (MQ=255) ggTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt > 1:5182885‑M1/1‑33 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttg > 1:1707069‑M1/1‑32 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttg > 1:1332660‑M1/1‑32 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttg > 1:5504076‑M1/1‑32 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttg < 1:2358764‑M1/35‑4 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttg > 1:2512836‑M1/1‑32 (MQ=255) tAGTTTTTTGTTAGCCGGATAAGGCACCGCTttga < 1:401578‑M1/35‑5 (MQ=255) tAGTTTTTTGTTAGCCGGATAAGGCACCGCTttga < 1:2643013‑M1/35‑5 (MQ=255) aGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaa < 1:3580831‑M1/35‑6 (MQ=255) gTTTTTTGTTAGCCGGATAAGGCACCGCTttgaag > 1:7497292‑M1/1‑29 (MQ=255) gTTTTTTGTTAGCCGGATAAGGCACCGCTttgaag > 1:4003002‑M1/1‑29 (MQ=255) gTTTTTTGTTAGCCGGATAAGGCACCGCTttgaag < 1:6132169‑M1/35‑7 (MQ=255) gTTTTTTGTTAGCCGGATAAGGCACCGCTttgaag > 1:690720‑M1/1‑29 (MQ=255) gTTTTTTGTTAGCCGGATAAGGCACCGCTctgaag > 1:7674259‑M1/1‑29 (MQ=255) ttttttGTTAGCCGGATAAGGCACCGCTttgaagc < 1:2505120‑M1/35‑8 (MQ=255) ttttttGTTAGCCGGATAAGGCACCGCTttgaagc < 1:5409551‑M1/35‑8 (MQ=255) ttttttGTTAGCCGGATAAGGCACCGCTttgaagc > 1:221026‑M1/1‑28 (MQ=255) ttttttGTTAGCCGGATAAGGCACCGCTttgaagc < 1:1415184‑M1/35‑8 (MQ=255) tttGTTAGCCGGATAAGGCACCGCTttgaagcgag > 1:7767547‑M1/1‑25 (MQ=255) tttGTTAGCCGGATAAGGCACCGCTttgaagcgag > 1:7365234‑M1/1‑25 (MQ=255) tttGTTAGCCGGATAAGGCACCGCTttgaagcgag > 1:6197292‑M1/1‑25 (MQ=255) ttGTTAGCCGGATAAGGCACCGCTttgaagcgagc > 1:7357008‑M1/1‑24 (MQ=255) tGTTAGCCGGATAAGGCACCGCTttgaagcgagcc < 1:5395875‑M1/35‑13 (MQ=255) gTTAGCCGGATAAGGCCCCGCTttgaagcgagccg < 1:1891808‑M1/35‑14 (MQ=255) ttAGCCGGATAAGGCACCGCTttgaagcgagccgc > 1:7778319‑M1/1‑21 (MQ=255) ttAGCCGGATAAGGCACCGCTttgaagcgagccgc > 1:1466047‑M1/1‑21 (MQ=255) tAGCCGGATAAGGCACCGCTttgaagcgagccgct > 1:4973527‑M1/1‑20 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctc < 1:4981929‑M1/35‑17 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctc > 1:692222‑M1/1‑19 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctc > 1:7531758‑M1/1‑19 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctc > 1:3313275‑M1/1‑19 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctc > 1:4234095‑M1/1‑19 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctc < 1:4323483‑M1/35‑17 (MQ=255) gCCGGATAAGGCACCGCTttgaagcgagccgctca > 1:2993819‑M1/1‑18 (MQ=255) ccGGATAAGGCACCGCTttgaagcgagccgctcaa < 1:453595‑M1/35‑19 (MQ=255) ccGGATAAGGCACCGCTttgaagcgagccgctcaa < 1:2282205‑M1/35‑19 (MQ=255) ccGGATAAGGCACCGCTttgaagcgagccgctcaa > 1:133323‑M1/1‑17 (MQ=255) ccGGATAAGGCACCGCTttgaagcgagccgctcaa < 1:30660‑M1/35‑19 (MQ=255) ccGGATAAGGCACCGCTttgaagcgagccgctcaa > 1:5019701‑M1/1‑17 (MQ=255) ccGGATAAGGCACCGCTttgaagcgagccgctcaa > 1:6458724‑M1/1‑17 (MQ=255) ggATAAGGCACCGCTttgaagcgagccgctcaata > 1:7155105‑M1/1‑15 (MQ=255) gATAAGGCACCGCTttgaagcgagccgctcaatac > 1:641992‑M1/1‑14 (MQ=255) gATAAGGCACCGCTttgaagcgagccgctcaatac < 1:1300906‑M1/35‑22 (MQ=255) gATAAGGCACCGCTttgaagcgagccgctcaatac > 1:4622682‑M1/1‑14 (MQ=255) gATAAGGCACCGCTttgaagcgagccgctcaatac > 1:7071422‑M1/1‑14 (MQ=255) aTAAGGCACCGCTttgaagcgagccgctcaatact < 1:4932707‑M1/35‑23 (MQ=255) aTAAGGCACCGCTttgaagcgagccgctcaatact > 1:5362218‑M1/1‑13 (MQ=255) aTAAGGCACCGCTttgaagcgagccgctcaatact > 1:678861‑M1/1‑13 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta > 1:536287‑M1/1‑12 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta < 1:1219263‑M1/35‑24 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta > 1:6456563‑M1/1‑12 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta > 1:2120932‑M1/1‑12 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta > 1:5425889‑M1/1‑12 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta > 1:7510175‑M1/1‑12 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta < 1:4435598‑M1/35‑24 (MQ=255) tAAGGCACCGCTttgaagcgagccgctcaatacta > 1:4312824‑M1/1‑12 (MQ=255) aaGGCACCGCTttgaagcgagccgctcaatactac > 1:7541980‑M1/1‑11 (MQ=255) aaGGCACCGCTttgaagcgagccgctcaatactac < 1:5683113‑M1/35‑25 (MQ=255) aaGGCACCGCTttgaagcgagccgctcaatactac > 1:3502959‑M1/1‑11 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca > 1:698122‑M1/1‑10 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca < 1:7425232‑M1/35‑26 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca < 1:7076679‑M1/35‑26 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca > 1:118295‑M1/1‑10 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca > 1:6319383‑M1/1‑10 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca > 1:4538830‑M1/1‑10 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca > 1:4342847‑M1/1‑10 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca > 1:4053912‑M1/1‑10 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactaca > 1:2986230‑M1/1‑10 (MQ=255) gCACCGCTttgaagcgagccgctcaatactacact > 1:1090651‑M1/1‑8 (MQ=255) gCACCGCTttgaagcgagccgctcaatactacact > 1:7746153‑M1/1‑8 (MQ=255) gCACCGCTttgaagcgagccgctcaatactacact < 1:645982‑M1/35‑28 (MQ=255) gCACCGCTttgaagcgagccgctcaatactacact < 1:2908005‑M1/35‑28 (MQ=255) cACCGCTttgaagcgagccgctcaatactacactt < 1:2288387‑M1/35‑29 (MQ=255) aCCGCTttgaagcgagccgctcaatactacacttt < 1:6150051‑M1/35‑30 (MQ=255) aCCGCTttgaagcgagccgctcaatactacacttt < 1:591740‑M1/35‑30 (MQ=255) aCCGCTttgaagcgagccgctcaatactacacttt < 1:1886196‑M1/35‑30 (MQ=255) ccGCTttgaagcgagccgctcaatactacactttt < 1:3403126‑M1/35‑31 (MQ=255) ccGCTttgaagcgagccgctcaatactacactttt < 1:2098086‑M1/35‑31 (MQ=255) ccGCTttgaagcgagccgctcaatactacactttt < 1:5504452‑M1/35‑31 (MQ=255) cGCTttgaagcgagccgctcaatactacacttttt < 1:7875696‑M1/35‑32 (MQ=255) gCTttgaagcgagccgctcaatactacacttttta > 1:2544932‑M1/1‑3 (MQ=255) cTttgaagcgagccgctcaatactacactttttag < 1:3713852‑M1/35‑34 (MQ=255) cTttgaagcgagccgctcaatactacactttttag < 1:2004539‑M1/35‑34 (MQ=255) cTttgaagcgagccgctcaatactacactttttag < 1:5229162‑M1/35‑34 (MQ=255) tttgaagcgagccgctcaatactacactttttagc < 1:7177441‑M1/35‑35 (MQ=255) | CTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTGCGTCCGGCAATTTCACCGCTCAGTACATACGTT > NC_000913/819741‑819809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |