| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 86 [0] | [0] 89 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 86 (1.180) | 56/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:3748660/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:2820858/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA < 1:4883925/50‑1 GGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:5190481/50‑1 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCC < 1:2580752/50‑1 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCC > 1:4447370/1‑50 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT < 1:5060118/50‑1 TCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTG < 1:2609055/50‑1 CAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:4691674/1‑50 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:3964477/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:2054873/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT < 1:3803965/49‑1 GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG > 1:1186797/1‑50 AAAATCGCTCATCCTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGT < 1:4622374/50‑1 AAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGT > 1:1207384/1‑50 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:2245662/50‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT > 1:5422812/1‑50 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT > 1:2193202/1‑50 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT < 1:3256433/50‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:4659988/50‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:5249899/50‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:2896779/50‑1 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:158800/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:4903978/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:2903628/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG < 1:903739/49‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG < 1:4490894/49‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG < 1:806054/49‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:5160233/48‑1 ACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT > 1:3145121/1‑50 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:4280472/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 1:1934666/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:1713965/1‑50 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:695524/1‑49 TTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC > 1:4193254/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:4880026/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:492332/48‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:1610214/49‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:5022013/1‑49 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:2114390/49‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:643584/1‑49 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:4648841/1‑50 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:460161/1‑50 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:4533840/1‑50 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:4331207/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:4080026/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:3448373/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:708022/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:2299327/49‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:3339244/1‑49 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:2098988/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:4907021/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:5241053/50‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:2872534/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:1130200/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:3757336/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:3203958/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:3259723/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:3313761/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:1613428/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:216540/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:1945237/49‑1 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG > 1:4787194/1‑49 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 1:4562083/50‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 1:616932/50‑1 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:2485599/1‑50 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:137073/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:4218434/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:5099107/1‑49 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA > 1:2597856/1‑50 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT > 1:3803178/1‑50 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:5316710/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:5233952/50‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:2391152/50‑1 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:4869000/50‑1 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT > 1:4849080/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:3128046/49‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:5175739/49‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:1414351/49‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:886037/49‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:3592255/48‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:3785316/48‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT > 1:3449998/1‑50 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT < 1:4060846/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 1:4916285/50‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > 1:791291/1‑50 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |