| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 86 [0] | [0] 89 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 86 (1.180) | 56/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165102‑2165199 | aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa > 1:3748660‑M1/1‑49 (MQ=255)aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa > 1:2820858‑M1/1‑49 (MQ=255)aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa < 1:4883925‑M1/50‑2 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAat < 1:5190481‑M1/50‑3 (MQ=255) cATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcc < 1:2580752‑M1/50‑5 (MQ=255) cATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcc > 1:4447370‑M1/1‑46 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct < 1:5060118‑M1/50‑6 (MQ=255) tCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctg < 1:2609055‑M1/50‑7 (MQ=255) cAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgt > 1:4691674‑M1/1‑43 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc < 1:3964477‑M1/50‑9 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc < 1:2054873‑M1/50‑9 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgt < 1:3803965‑M1/49‑8 (MQ=255) gAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcg > 1:1186797‑M1/1‑41 (MQ=255) aaaaTCGCTCATCCTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt < 1:4622374‑M1/50‑11 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt > 1:1207384‑M1/1‑40 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttg < 1:2245662‑M1/50‑14 (MQ=255) tCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgt > 1:5422812‑M1/1‑36 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt > 1:2193202‑M1/1‑34 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:3256433‑M1/50‑17 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtttt < 1:4659988‑M1/50‑18 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtttt < 1:5249899‑M1/50‑18 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtttt < 1:2896779‑M1/50‑18 (MQ=255) tCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc > 1:158800‑M1/1‑32 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga > 1:4903978‑M1/1‑30 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga > 1:2903628‑M1/1‑30 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcg < 1:903739‑M1/49‑20 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcg < 1:4490894‑M1/49‑20 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcg < 1:806054‑M1/49‑20 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc < 1:5160233‑M1/48‑19 (MQ=255) aCTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatt > 1:3145121‑M1/1‑28 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt < 1:4280472‑M1/50‑24 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt < 1:1934666‑M1/50‑24 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt > 1:1713965‑M1/1‑27 (MQ=255) tttAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt > 1:695524‑M1/1‑26 (MQ=255) ttAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttc > 1:4193254‑M1/1‑25 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttca > 1:4880026‑M1/1‑24 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttc < 1:492332‑M1/48‑25 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa < 1:1610214‑M1/49‑27 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa > 1:5022013‑M1/1‑23 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa < 1:2114390‑M1/49‑27 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa > 1:643584‑M1/1‑23 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:4648841‑M1/1‑22 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:460161‑M1/1‑22 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa > 1:4533840‑M1/1‑22 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaa < 1:4331207‑M1/50‑29 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 1:4080026‑M1/49‑28 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 1:3448373‑M1/49‑28 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaata < 1:708022‑M1/49‑31 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaata < 1:2299327‑M1/49‑31 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatat > 1:3339244‑M1/1‑18 (MQ=255) tAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataa < 1:2098988‑M1/50‑34 (MQ=255) tAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataa < 1:4907021‑M1/50‑34 (MQ=255) tAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataa < 1:5241053‑M1/50‑34 (MQ=255) tAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataa < 1:2872534‑M1/50‑34 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatg < 1:1130200‑M1/50‑36 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:3757336‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:3203958‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:3259723‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:3313761‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:1613428‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:216540‑M1/49‑35 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat < 1:1945237‑M1/49‑35 (MQ=255) aCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatg > 1:4787194‑M1/1‑14 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaa < 1:4562083‑M1/50‑38 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaa < 1:616932‑M1/50‑38 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat > 1:2485599‑M1/1‑11 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat < 1:137073‑M1/50‑40 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatt < 1:4218434‑M1/50‑41 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat > 1:5099107‑M1/1‑10 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta > 1:2597856‑M1/1‑9 (MQ=255) ccTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattat > 1:3803178‑M1/1‑8 (MQ=255) ccTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattat < 1:5316710‑M1/50‑43 (MQ=255) ccTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattat < 1:5233952‑M1/50‑43 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt < 1:2391152‑M1/50‑44 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt < 1:4869000‑M1/50‑44 (MQ=255) tttAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt > 1:4849080‑M1/1‑6 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg < 1:3128046‑M1/49‑46 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg < 1:5175739‑M1/49‑46 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg < 1:1414351‑M1/49‑46 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg < 1:886037‑M1/49‑46 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt < 1:3592255‑M1/48‑45 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattattt < 1:3785316‑M1/48‑45 (MQ=255) aGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt > 1:3449998‑M1/1‑3 (MQ=255) aGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgt < 1:4060846‑M1/49‑47 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgttt < 1:4916285‑M1/50‑49 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt > 1:791291‑M1/1‑1 (MQ=255) | AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165102‑2165199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |