Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 113 [0] | [0] 113 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 167483 | 0 (0.000) | 110 (1.510) | 69/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase |
Only 100 of 113 total aligned reads displayed.
ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCG > NC_000913/167434‑167532 | ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 1:1220510/1‑50 (MQ=255) ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 1:2692847/1‑50 (MQ=255) ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa < 1:2066923/50‑1 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:5273522‑M1/50‑2 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:3011230‑M1/50‑2 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt > 1:4372660‑M1/1‑49 (MQ=255) aaTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt > 1:5170171‑M1/1‑48 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc < 1:219308‑M1/50‑4 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt < 1:4132391‑M1/49‑3 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt < 1:2024161‑M1/49‑3 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:5500322‑M1/1‑46 (MQ=255) cATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:1573091‑M1/1‑45 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccat < 1:4229602‑M1/50‑7 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 1:3688135‑M1/49‑6 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata < 1:4144104‑M1/50‑8 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat < 1:1255410‑M1/49‑9 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat < 1:1473173‑M1/49‑9 (MQ=255) tcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa > 1:3481580‑M1/1‑40 (MQ=255) cGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac > 1:4324047‑M1/1‑39 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 1:1604640‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac < 1:2583365‑M1/49‑12 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa < 1:3484710‑M1/48‑11 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa < 1:3562800‑M1/48‑11 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa < 1:862453‑M1/48‑11 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa < 1:2132791‑M1/48‑11 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:75249‑M1/47‑10 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:2479374‑M1/47‑10 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:4393878‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:4843874‑M1/50‑14 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc < 1:3400158‑M1/49‑15 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccc > 1:2054650‑M1/1‑34 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc < 1:4458556‑M1/49‑16 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc < 1:3369551‑M1/49‑16 (MQ=255) cGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccca < 1:3070769‑M1/50‑18 (MQ=255) cGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccc < 1:5174857‑M1/49‑17 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg < 1:1276466‑M1/50‑19 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg < 1:1386422‑M1/50‑19 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:5360421‑M1/1‑32 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgt < 1:5232726‑M1/50‑20 (MQ=255) tATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta > 1:3787089‑M1/1‑30 (MQ=255) tATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta > 1:5117182‑M1/1‑30 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta < 1:2431827‑M1/49‑21 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta < 1:3523582‑M1/49‑21 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg < 1:4874575‑M1/50‑23 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:267558‑M1/49‑22 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:5175177‑M1/49‑22 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:5130667‑M1/49‑22 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 1:4890039‑M1/1‑27 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 1:843490‑M1/1‑27 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 1:2802477‑M1/1‑27 (MQ=255) aTTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcc > 1:5506133‑M1/1‑26 (MQ=255) aTTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc < 1:2833261‑M1/49‑24 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:3622549‑M1/50‑26 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:164817‑M1/50‑26 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct > 1:5351621‑M1/1‑25 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:1127502‑M1/1‑24 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:453691‑M1/1‑24 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:1598301‑M1/1‑24 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:2035694‑M1/1‑24 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:2286345‑M1/1‑24 (MQ=255) cACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:5188277‑M1/1‑23 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgga > 1:2099717‑M1/1‑22 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgg < 1:1894734‑M1/49‑28 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccttgtacgcctggac < 1:2691549‑M1/50‑30 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:931826‑M1/1‑21 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:647719‑M1/1‑20 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:4363084‑M1/1‑20 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:845343‑M1/1‑20 (MQ=255) ttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:4148383‑M1/1‑19 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:4427677‑M1/48‑31 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:2729854‑M1/1‑17 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:377605‑M1/1‑17 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggata < 1:3801345‑M1/50‑35 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggata < 1:4740203‑M1/50‑35 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat < 1:5387219‑M1/49‑34 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat < 1:3728163‑M1/49‑34 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat < 1:1230493‑M1/49‑34 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 1:3966844‑M1/1‑16 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat < 1:3551856‑M1/49‑34 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggataaa < 1:4195997‑M1/50‑37 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggata > 1:720626‑M1/1‑14 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggata > 1:2642648‑M1/1‑14 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc > 1:5398403‑M1/1‑12 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 1:1086409‑M1/50‑39 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 1:5429674‑M1/50‑39 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaag < 1:1077399‑M1/49‑38 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagcg < 1:546105‑M1/50‑40 (MQ=255) agaTATACCAttccatataacggccctgtacgcctggacggataaagcgt < 1:3681323‑M1/50‑41 (MQ=255) agaTATACCAttccatataacggccctgtacgcctggacggataaagcgt > 1:3508175‑M1/1‑10 (MQ=255) agaTATACCAttccatataacggccctgtacgcctggacggataaagcgt < 1:3857659‑M1/50‑41 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt < 1:260675‑M1/50‑42 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgttt < 1:4690558‑M1/50‑43 (MQ=255) ataCCAttccatataacggccctgtacgcctggacggataaagcgtttac > 1:159384‑M1/1‑6 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 1:4079234‑M1/49‑45 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 1:1643162‑M1/49‑45 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 1:4350281‑M1/49‑45 (MQ=255) ccAttccatataacggccctgtacgcctggacggataaagcgtttacgc < 1:5197259‑M1/49‑47 (MQ=255) ccAttccatataacggccctgtacgcctggacggataaagcgtttacgc < 1:1525619‑M1/49‑47 (MQ=255) attccatataacggccctgtacgcctggtcggataaagcgtttacgcga > 1:4865842‑M1/1‑1 (MQ=255) attccatataacggccctgtacgcctggacggataaagcgtttacgcgac < 1:2290302‑M1/50‑50 (MQ=255) | ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCG > NC_000913/167434‑167532 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |