| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 113 [0] | [0] 113 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 108 (1.550) | 63/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 113 total aligned reads displayed.
CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCC > NC_000913/2994942‑2995040 | tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:3529379‑M1/1‑49 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:4943680‑M1/1‑49 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:1158499‑M1/1‑47 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCac < 1:5264946‑M1/49‑3 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:4989534‑M1/48‑2 (MQ=255) aGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:2232384‑M1/1‑46 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta > 1:4643527‑M1/1‑45 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:4168599‑M1/50‑6 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta > 1:178097‑M1/1‑45 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:5209270‑M1/50‑6 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:5231445‑M1/50‑7 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat > 1:2448218‑M1/1‑44 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:3153505‑M1/50‑7 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt < 1:2654044‑M1/50‑8 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt < 1:2047482‑M1/50‑8 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:461476‑M1/1‑43 (MQ=255) ttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:3165513‑M1/1‑42 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt > 1:1859866‑M1/1‑41 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt > 1:119597‑M1/1‑41 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:610603‑M1/49‑9 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:4977127‑M1/49‑9 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:1330891‑M1/49‑9 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa > 1:3178037‑M1/1‑40 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:613870‑M1/49‑10 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:4699282‑M1/49‑10 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaac < 1:2809909‑M1/50‑12 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa < 1:1757875‑M1/49‑11 (MQ=255) ttACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaa < 1:2503441‑M1/49‑11 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:529917‑M1/50‑15 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac > 1:1130678‑M1/1‑36 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:3823261‑M1/50‑15 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:662138‑M1/50‑15 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa < 1:4117598‑M1/49‑14 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa < 1:865902‑M1/49‑14 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa < 1:2658715‑M1/49‑14 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa < 1:1948268‑M1/49‑14 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact < 1:4359213‑M1/50‑16 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact < 1:2655186‑M1/50‑16 (MQ=255) acTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaact > 1:3131889‑M1/1‑35 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt < 1:491991‑M1/50‑17 (MQ=255) cTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt < 1:1224879‑M1/50‑17 (MQ=255) tCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt > 1:5412561‑M1/1‑33 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga < 1:4267644‑M1/49‑19 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga < 1:1257626‑M1/49‑19 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:3114036‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:859806‑M1/48‑18 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttg < 1:5045522‑M1/48‑18 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaa < 1:3717493‑M1/50‑21 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaa < 1:1190549‑M1/50‑21 (MQ=255) cTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:2695628‑M1/1‑29 (MQ=255) cTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:2964739‑M1/1‑29 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:3592052‑M1/1‑28 (MQ=255) tataGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaa > 1:4751304‑M1/1‑28 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataa < 1:2908769‑M1/50‑25 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataa < 1:4509179‑M1/50‑25 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaata < 1:3215369‑M1/49‑24 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat < 1:2585998‑M1/48‑23 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat > 1:420422‑M1/1‑26 (MQ=255) aGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag > 1:4475477‑M1/1‑25 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:4600434‑M1/1‑22 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtt > 1:1454367‑M1/1‑20 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt < 1:2399286‑M1/49‑30 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:410155‑M1/1‑19 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:2975398‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:1769206‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:1464743‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:3187624‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:5484321‑M1/49‑34 (MQ=255) aGATCTTTATAGGCCacttatttaacaacttgaaaataaggtgttttac < 1:4382454‑M1/49‑35 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc > 1:791245‑M1/1‑15 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc > 1:3590899‑M1/1‑15 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:380439‑M1/49‑35 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:4347175‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:1896908‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:1642850‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct > 1:4746307‑M1/1‑14 (MQ=255) aTCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctg > 1:626536‑M1/1‑13 (MQ=255) tttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggt > 1:3217461‑M1/1‑10 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg > 1:2619419‑M1/1‑8 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg > 1:4070639‑M1/1‑8 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg > 1:2533041‑M1/1‑8 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt < 1:191039‑M1/49‑42 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt < 1:1584818‑M1/49‑42 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgg < 1:1162851‑M1/46‑39 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:1387733‑M1/1‑7 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtt < 1:4185268‑M1/50‑45 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:3771032‑M1/1‑6 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:1441955‑M1/1‑6 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:3178094‑M1/1‑6 (MQ=255) aGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:5384608‑M1/1‑5 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgttac < 1:4494270‑M1/50‑47 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta < 1:524700‑M1/49‑46 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta < 1:3983357‑M1/49‑46 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:4362890‑M1/1‑4 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca < 1:3218554‑M1/50‑48 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca < 1:314277‑M1/50‑48 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa < 1:4615103‑M1/50‑49 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca > 1:3528901‑M1/1‑2 (MQ=255) cacttatttaacaacttgaaaataaggtgttttacctgggttgttacaaa < 1:15278‑M1/50‑50 (MQ=255) cacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa > 1:1500361‑M1/1‑1 (MQ=255) | CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATCC > NC_000913/2994942‑2995040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |