| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 108 [0] | [0] 106 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 106 (1.460) | 58/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 108 total aligned reads displayed.
CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 | cTATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt > 1:1943070/1‑49 (MQ=255) tataTTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa > 1:25260‑M1/1‑48 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:2048500/46‑1 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact < 1:572126‑M1/50‑5 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac < 1:2331081‑M1/49‑4 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac < 1:2020719‑M1/49‑4 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa < 1:860773‑M1/48‑3 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 1:5088097‑M1/1‑45 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 1:5288908‑M1/1‑45 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 1:2032596‑M1/1‑45 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:1434012‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:1779934‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt < 1:3379602‑M1/49‑6 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt < 1:124877‑M1/49‑6 (MQ=255) ttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:1202874‑M1/1‑43 (MQ=255) tCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttga > 1:4447263‑M1/1‑42 (MQ=255) tCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttg < 1:4593393‑M1/49‑8 (MQ=255) gcgcaTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatt > 1:4649899‑M1/3‑39 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:1908102‑M1/2‑38 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt < 1:1934569‑M1/48‑12 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttat < 1:3381442‑M1/50‑14 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:706979‑M1/1‑37 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata < 1:3666254‑M1/50‑15 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata < 1:3398174‑M1/50‑15 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata < 1:2536858‑M1/50‑15 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:3170010‑M1/1‑36 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:1233223‑M1/1‑36 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:1323460‑M1/1‑36 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag > 1:753358‑M1/1‑35 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag < 1:3573768‑M1/50‑16 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag > 1:404604‑M1/1‑35 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag < 1:1436346‑M1/50‑16 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:2433821‑M1/1‑33 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:4648986‑M1/1‑33 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:1206692‑M1/1‑33 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtc < 1:3918262‑M1/49‑18 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtc < 1:3037981‑M1/49‑18 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcag < 1:194166‑M1/50‑20 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtca < 1:605833‑M1/49‑19 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtca < 1:5247895‑M1/49‑19 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg > 1:4936301‑M1/1‑30 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg < 1:5424630‑M1/50‑21 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg > 1:1511555‑M1/1‑28 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg > 1:641330‑M1/1‑28 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgg > 1:4628160‑M1/1‑27 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgg > 1:5293853‑M1/1‑27 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgg > 1:2174368‑M1/1‑27 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgg > 1:1141022‑M1/1‑27 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg > 1:4793544‑M1/1‑25 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg > 1:180370‑M1/1‑25 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggc < 1:4022928‑M1/49‑27 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggc < 1:532426‑M1/49‑27 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg < 1:5096438‑M1/48‑26 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg < 1:2962372‑M1/48‑26 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg < 1:3940009‑M1/48‑26 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttt > 1:5523586‑M1/1‑21 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttt > 1:3931363‑M1/1‑21 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttt > 1:3919984‑M1/1‑21 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttt > 1:1847883‑M1/1‑21 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt > 1:4357697‑M1/1‑20 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt > 1:1173215‑M1/1‑20 (MQ=255) gtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc > 1:1594920‑M1/1‑19 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct < 1:1372195‑M1/50‑33 (MQ=255) tGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc > 1:4786541‑M1/1‑17 (MQ=255) tGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc > 1:166216‑M1/1‑17 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct > 1:963650‑M1/1‑16 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc < 1:1947178‑M1/49‑34 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc < 1:2018376‑M1/49‑34 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 1:1204188‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 1:4069876‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg > 1:5527130‑M1/1‑15 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 1:597387‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct < 1:4362497‑M1/49‑35 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct < 1:919355‑M1/49‑35 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt > 1:4581422‑M1/1‑14 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt > 1:4651644‑M1/1‑14 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt < 1:3909722‑M1/50‑37 (MQ=255) ttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtc > 1:2656959‑M1/1‑13 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg > 1:4398560‑M1/1‑11 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg > 1:2217171‑M1/1‑11 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg > 1:3815917‑M1/1‑11 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:4029024‑M1/49‑39 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:5062641‑M1/49‑39 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc > 1:4484746‑M1/1‑10 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc > 1:1927660‑M1/1‑10 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc > 1:2519361‑M1/1‑10 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg < 1:246143‑M1/49‑40 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg < 1:3378740‑M1/49‑40 (MQ=255) aaCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcc > 1:4186689‑M1/1‑9 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcct > 1:4977779‑M1/1‑8 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcct > 1:4502945‑M1/1‑8 (MQ=255) cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt > 1:264814‑M1/1‑7 (MQ=255) cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt < 1:729335‑M1/50‑44 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt > 1:3931474‑M1/1‑6 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt < 1:1446127‑M1/50‑45 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc < 1:3938559‑M1/50‑46 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg > 1:2460157‑M1/1‑4 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg < 1:1732177‑M1/50‑47 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg > 1:4209714‑M1/1‑4 (MQ=255) ataactttgatttatagtcaggtggggcttttctctgtctgcctttcggt > 1:4735428‑M1/1‑2 (MQ=255) | CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |