Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 108 [0] | [0] 106 | insJ–insK | insJ,insK |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3720633 | 0 (0.000) | 106 (1.460) | 58/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta |
Only 100 of 106 total aligned reads displayed.
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722028‑3722123 | tatatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa > 1:25260‑M2/49‑50 (MQ=255) atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:3825813‑M2/48‑50 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa < 1:860773‑M2/2‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc < 1:2020719‑M2/3‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc < 1:2331081‑M2/3‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt < 1:572126‑M2/4‑1 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt > 1:2032596‑M2/46‑50 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt > 1:5088097‑M2/46‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:1434012‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt < 1:124877‑M2/5‑1 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt < 1:3379602‑M2/5‑1 (MQ=255) ttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:1202874‑M2/44‑49 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:4709202‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:4593393‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGa > 1:4447263‑M2/43‑50 (MQ=255) gcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt > 1:4649899‑M2/40‑49 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:1934569‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:1908102‑M2/39‑50 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtat < 1:3381442‑M2/13‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:706979‑M2/38‑49 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:3666254‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:2536858‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:3398174‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:3170010‑M2/37‑48 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:1323460‑M2/37‑48 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:1233223‑M2/37‑48 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:1951655‑M2/37‑48 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:3573768‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg > 1:753358‑M2/36‑50 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:1436346‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg > 1:404604‑M2/36‑50 (MQ=255) tcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:1206692‑M2/34‑49 (MQ=255) tcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:2433821‑M2/34‑49 (MQ=255) tcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:2588189‑M2/34‑49 (MQ=255) tcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:4648986‑M2/34‑49 (MQ=255) cccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTc < 1:3918262‑M2/17‑1 (MQ=255) cccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTc < 1:3037981‑M2/17‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCa < 1:605833‑M2/18‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCa < 1:5247895‑M2/18‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg > 1:154334‑M2/32‑50 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg < 1:194166‑M2/19‑1 (MQ=255) cagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAgg > 1:4936301‑M2/31‑50 (MQ=255) cagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAgg < 1:5424630‑M2/20‑1 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg > 1:641330‑M2/29‑50 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg > 1:1511555‑M2/29‑50 (MQ=255) cctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg > 1:4628160‑M2/28‑50 (MQ=255) cctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg > 1:1141022‑M2/28‑50 (MQ=255) cctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg > 1:5293853‑M2/28‑50 (MQ=255) cctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg > 1:2174368‑M2/28‑50 (MQ=255) ctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTggg < 1:4234345‑M2/24‑1 (MQ=255) tcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg > 1:4793544‑M2/26‑50 (MQ=255) tcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg > 1:180370‑M2/26‑50 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg < 1:2962372‑M2/25‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg < 1:5096438‑M2/25‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg < 1:3940009‑M2/25‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGc < 1:532426‑M2/26‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGc < 1:4022928‑M2/26‑1 (MQ=255) gtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCttt > 1:3919984‑M2/22‑50 (MQ=255) gtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCttt > 1:3931363‑M2/22‑50 (MQ=255) gtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCttt > 1:5523586‑M2/22‑50 (MQ=255) gtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCttt > 1:1847883‑M2/22‑50 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt > 1:1173215‑M2/21‑50 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt > 1:4357697‑M2/21‑50 (MQ=255) gttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc > 1:1594920‑M2/20‑50 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:1372195‑M2/32‑1 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:5456288‑M2/32‑1 (MQ=255) tgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc > 1:166216‑M2/18‑50 (MQ=255) tgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc > 1:4786541‑M2/18‑50 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc < 1:1947178‑M2/33‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc < 1:2018376‑M2/33‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct > 1:963650‑M2/17‑50 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:4362497‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:919355‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg < 1:1204188‑M2/35‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg < 1:597387‑M2/35‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg > 1:5527130‑M2/16‑50 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg < 1:4069876‑M2/35‑1 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt > 1:4581422‑M2/15‑50 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt > 1:4651644‑M2/15‑50 (MQ=255) ttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtc > 1:2656959‑M2/14‑50 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg > 1:3815917‑M2/12‑50 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg > 1:4398560‑M2/12‑50 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg > 1:2217171‑M2/12‑50 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct < 1:4029024‑M2/38‑1 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct < 1:5062641‑M2/38‑1 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg < 1:246143‑M2/39‑1 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg < 1:3378740‑M2/39‑1 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGc > 1:1927660‑M2/11‑50 (MQ=255) aacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGcc > 1:4186689‑M2/10‑50 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt > 1:4977779‑M2/9‑50 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt > 1:4502945‑M2/9‑50 (MQ=255) cgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCtt > 1:264814‑M2/8‑50 (MQ=255) cgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCtt < 1:729335‑M2/43‑1 (MQ=255) gagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCttt < 1:1446127‑M2/44‑1 (MQ=255) gagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCttt > 1:3931474‑M2/7‑50 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 1:3938559‑M2/45‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg > 1:2460157‑M2/5‑50 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg < 1:1732177‑M2/46‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg > 1:4209714‑M2/5‑50 (MQ=255) atAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:4735428‑M2/3‑50 (MQ=255) | GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722028‑3722123 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |