| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 64 [0] | [0] 65 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 64 (1.100) | 48/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:2326662/1‑50 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:4354446/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:3303512/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:518325/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:2427534/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:416501/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:754369/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:2256534/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:4172418/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:602018/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1284605/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 1:908936/1‑49 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:4258308/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:2581213/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3878154/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:2363588/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:282205/50‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:3545715/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC < 1:1689121/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:1771974/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:172888/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:2517136/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:4350371/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:2587017/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:2808297/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCTCTG > 1:780816/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:2963731/50‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:2758392/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:1371678/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:2531060/49‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:983164/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:2542078/1‑50 TTCACTTTACATCAGAGATATACCATTCCATACAACGGCCCTGTACGCCT < 1:3230889/50‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:1020898/49‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:3704520/1‑49 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:2308068/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3995312/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3632921/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:1617847/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3264027/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3013906/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:1540443/50‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:4214041/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3219914/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:640433/48‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:1458291/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:3632277/1‑49 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:2615974/1‑49 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:2629194/1‑50 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:3425758/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:2914531/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:1462112/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:2118341/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:1309924/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:3308765/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:2450591/1‑49 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:249053/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:3332571/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 1:3525574/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:3404279/1‑49 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA < 1:4312295/50‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:1716493/1‑50 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 1:1239746/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:1595134/1‑49 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |