| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 42 (0.940) +CGAGATGGACG |
25/76 | 0.2 | 64.5% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 60 (1.040) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
AGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380064‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGG > NC_000913/624576‑624614 ||||||||||| AGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:844779/1‑49 GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGA < 1:1373543/50‑1 GGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAC > 1:4105489/1‑48 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 1:1362550/50‑1 GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 1:1405189/50‑1 AATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGA < 1:1462890/50‑1 ATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGAT < 1:3739179/50‑1 ATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGAT > 1:236108/1‑50 TCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 1:3130207/1‑50 TCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG < 1:1534281/50‑1 CAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 1:1326791/1‑49 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGG < 1:3925954/49‑1 ATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGG > 1:1751499/1‑50 TTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGT < 1:3441216/50‑1 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC > 1:523399/1‑50 CCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC > 1:958720/1‑50 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC > 1:1815789/1‑50 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC < 1:2006986/49‑1 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT > 1:4038488/1‑50 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:4360505/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:1886505/50‑1 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:2847042/50‑1 TCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGC > 1:508209/1‑50 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC < 1:134034/50‑1 CGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCct > 1:3900561/1‑48 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT > 1:933435/1‑50 GCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGG > 1:355722/1‑50 GCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGG > 1:3148003/1‑50 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:99981/1‑50 CTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG < 1:2706045/50‑1 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA < 1:3004847/49‑1 AAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA > 1:2955058/1‑48 AAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA > 1:3210264/1‑48 AAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGA > 1:2969948/1‑48 AGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAG < 1:1686071/50‑1 AGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAG < 1:1382644/50‑1 AGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAG < 1:1944157/50‑1 TTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGG > 1:93735/1‑50 TTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGG > 1:2746657/1‑50 TTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGG > 1:2481175/1‑50 GCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT < 1:161675/49‑1 CAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT > 1:2383063/1‑48 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG > 1:3044611/1‑50 GACCGTTACGAGATTGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG > 1:3436646/1‑50 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG > 1:1988357/1‑50 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG > 1:448073/1‑50 GACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGG > 1:996739/1‑50 ACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGG < 1:1729967/50‑1 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTG < 1:201179/50‑1 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTG < 1:1570815/50‑1 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGT > 1:106873/1‑49 GTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGA < 1:4021692/50‑1 GTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGA < 1:3290864/50‑1 ACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAGG < 1:3013144/49‑1 CGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAGGGG < 1:2782246/50‑1 CGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAGGG < 1:1649660/49‑1 ||||||||||| AGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380064‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGG > NC_000913/624576‑624614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |