| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 77 [0] | [0] 75 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 63 (0.950) | 49/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558643‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:3449834/1‑49GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:731441/1‑49 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:4376429/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:5040233/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:4825340/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:6000307/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT < 1:2474823/48‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT < 1:5377473/48‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG < 1:4289880/50‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG < 1:3098634/50‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:352905/1‑49 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:3746682/1‑49 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:392066/49‑1 ACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:2641391/1‑48 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:5808133/1‑50 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:4108756/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:1433588/1‑49 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:4980379/1‑49 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG > 1:958506/1‑49 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAA < 1:3603634/49‑1 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG > 1:4690223/1‑50 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG < 1:4682121/50‑1 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:393737/1‑50 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC < 1:5054598/50‑1 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:415989/1‑50 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC < 1:2276/50‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:3046309/1‑49 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:3551289/1‑49 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGA < 1:1005955/50‑1 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:109816/1‑48 CAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAG > 1:180020/1‑50 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT < 1:2473033/50‑1 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:1083924/1‑50 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:807446/1‑50 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTG < 1:3057417/50‑1 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA > 1:1829197/1‑50 GTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT > 1:2273441/1‑50 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATT > 1:1545931/1‑50 GGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:896514/1‑50 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTC < 1:1164755/50‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:962278/1‑49 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT < 1:5682776/49‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:5768149/1‑49 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA > 1:1050934/1‑50 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA < 1:2223458/50‑1 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA < 1:3856642/50‑1 CTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC > 1:1674844/1‑50 TTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACC > 1:2087054/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT > 1:359631/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG < 1:3437415/49‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACC < 1:159888/48‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACC < 1:5974393/48‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACC < 1:750168/48‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC < 1:810492/47‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:3395078/49‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA < 1:2716893/50‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA < 1:5896324/50‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTC < 1:180098/49‑1 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC > 1:4307704/1‑50 TTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC > 1:1249130/1‑50 TTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC > 1:3160671/1‑50 TCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC < 1:4236663/49‑1 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:1106712/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:265654/49‑1 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:605479/49‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:1050302/1‑49 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACA < 1:3848056/50‑1 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACA < 1:3819691/50‑1 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCAC > 1:4534120/1‑49 GTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA > 1:4868972/1‑50 GTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA < 1:2863707/50‑1 GTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA > 1:4375577/1‑50 TCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAC > 1:5035680/1‑50 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:2106426/49‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:2700191/49‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:2526042/1‑49 TTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGA > 1:1025346/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:3017490/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC < 1:1289520/50‑1 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG > 1:2343675/1‑50 TCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:4857057/1‑50 TCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:314998/1‑50 TCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:3391896/1‑50 CAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:4283915/1‑49 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCC > 1:5643257/1‑49 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA > 1:5765436/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:2139227/1‑49 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:5566202/50‑1 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:2649683/1‑48 GGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG < 1:1805574/50‑1 GGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:5954864/1‑47 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558643‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |