| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 64 [0] | [0] 64 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 64 (1.250) | 45/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167436‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:1886620/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:3215566/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:286952/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:2882949/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:945832/50‑1 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:3252916/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:3022732/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:1741252/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:1183108/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:3714962/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:3808919/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1671240/1‑49 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1829548/1‑49 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1077604/1‑49 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:79758/1‑49 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:534355/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:475410/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:1128352/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:3054250/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:1876185/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:3344349/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:2673693/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:1140108/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:1618163/50‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:1491876/1‑50 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:2394462/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:774440/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:3948232/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:3015332/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:287236/50‑1 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:466084/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:2601374/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:855508/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:2820800/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:1163000/49‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:1482842/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:3129294/50‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC < 1:2187262/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:3091542/50‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3833322/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:3277865/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3688788/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:367625/1‑50 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:209944/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:486110/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:3631194/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:2132317/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:2479453/1‑48 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:2075094/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:209109/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:3501566/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:1489163/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:891859/49‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:2162361/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:2024857/50‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:1460072/50‑1 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:1397453/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:1197866/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 1:3606573/50‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 1:1137311/50‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA < 1:467731/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 1:258886/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:3777316/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:2431989/1‑49 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167436‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |