| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 64 [0] | [0] 64 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 64 (1.250) | 45/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
GGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173400‑173496 | aatcattctcgtttacgttatcattcactttacatcagagatataccatt > 1:1886620‑M2/49‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccatt < 1:2882949‑M2/2‑1 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:3215566‑M2/48‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:286952‑M2/48‑50 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTcc < 1:945832‑M2/4‑1 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:3252916‑M2/46‑50 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCat < 1:3022732‑M2/6‑1 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCat < 1:1741252‑M2/6‑1 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:1183108‑M2/45‑49 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:3714962‑M2/45‑49 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata < 1:3808919‑M2/7‑1 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:1671240‑M2/43‑49 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:1829548‑M2/43‑49 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:1077604‑M2/43‑49 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:79758‑M2/43‑49 (MQ=255) cgtttacgttatcattcactttacatcagagatataccaTTCCATATAAc > 1:534355‑M2/40‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:1140108‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:2673693‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:1876185‑M2/11‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:3344349‑M2/11‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:475410‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:1128352‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:3054250‑M2/39‑50 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:1618163‑M2/13‑1 (MQ=255) ttacgttatcattcactttacatcagagatataccaTTCCATATAACGGc > 1:1491876‑M2/37‑50 (MQ=255) ttacgttatcattcactttacatcagagatataccaTTCCATATAACGGc > 1:2394462‑M2/37‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:774440‑M2/33‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:3948232‑M2/33‑50 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGt < 1:3015332‑M2/19‑1 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGt < 1:287236‑M2/19‑1 (MQ=255) tatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa > 1:466084‑M2/31‑50 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:2601374‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:855508‑M2/20‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:2820800‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:1163000‑M2/21‑1 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 1:1482842‑M2/28‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc < 1:3129294‑M2/24‑1 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc < 1:2187262‑M2/23‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:3091542‑M2/25‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa > 1:3833322‑M2/23‑50 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc > 1:3277865‑M2/22‑50 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:3688788‑M2/19‑50 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:367625‑M2/19‑50 (MQ=255) acatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa < 1:209944‑M2/32‑1 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt < 1:486110‑M2/33‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:3631194‑M2/35‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:2132317‑M2/36‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:2479453‑M2/15‑48 (MQ=255) cagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg > 1:2075094‑M2/14‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg < 1:891859‑M2/37‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 1:209109‑M2/38‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:3501566‑M2/13‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:1489163‑M2/13‑50 (MQ=255) gatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:2162361‑M2/10‑50 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:2024857‑M2/43‑1 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:1460072‑M2/43‑1 (MQ=255) ataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc > 1:1397453‑M2/7‑50 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc < 1:1197866‑M2/44‑1 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgcg < 1:3606573‑M2/47‑1 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgcg < 1:1137311‑M2/47‑1 (MQ=255) caTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa < 1:467731‑M2/48‑1 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:3777316‑M2/2‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:2431989‑M2/2‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc < 1:258886‑M2/49‑1 (MQ=255) | GGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173400‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |