| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 53 [0] | [0] 53 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 51 (0.990) | 39/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:2247688/50‑1GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:2238081/1‑50GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:3134072/1‑50 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:648515/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:410534/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT > 1:3090007/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:3359835/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:116255/1‑50 GATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1283839/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:591307/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:3031487/48‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:3680874/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:3125720/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:1848553/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:1033205/50‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:2996727/1‑50 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:2678963/50‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT > 1:239608/1‑50 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC < 1:239489/50‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:2881006/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:1139824/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:364328/49‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:274954/50‑1 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA < 1:218318/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:3713507/50‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTT < 1:1173026/49‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:2794913/49‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:1283907/1‑50 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:3870877/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:3484880/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:506669/1‑49 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:1985424/1‑49 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:2706364/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:983327/1‑49 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:1590669/50‑1 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:1707589/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:1459955/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:1563735/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:844227/1‑47 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:1220903/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG > 1:3645468/1‑49 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:251433/50‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA > 1:3786479/1‑49 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:442380/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA > 1:171551/1‑49 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:1740370/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:2880335/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:3609302/49‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:1167464/50‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:859973/50‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > 1:2702847/1‑48 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |