| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 53 [0] | [0] 53 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 51 (0.990) | 39/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 | gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca < 1:2247688‑M2/1‑1 (MQ=255)gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca > 1:2238081‑M2/50‑50 (MQ=255)gtctgatttcgcacagcaataaagagaatatgggccgaatgaaattccca > 1:3134072‑M2/50‑50 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:648515‑M2/2‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:410534‑M2/2‑1 (MQ=255) tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt > 1:3090007‑M2/49‑50 (MQ=255) tgatttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg > 1:3359835‑M2/47‑50 (MQ=255) tgatttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg > 1:116255‑M2/47‑50 (MQ=255) gatttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:1283839‑M2/46‑50 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATgg < 1:3031487‑M2/4‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:591307‑M2/45‑49 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc < 1:3680874‑M2/11‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc > 1:3125720‑M2/40‑50 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc > 1:1848553‑M2/40‑50 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc < 1:1033205‑M2/11‑1 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt > 1:2996727‑M2/39‑50 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt < 1:2678963‑M2/16‑1 (MQ=255) ataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTAt > 1:239608‑M2/32‑50 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc < 1:239489‑M2/20‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATcc < 1:364328‑M2/21‑1 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa > 1:2881006‑M2/29‑50 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa > 1:1139824‑M2/29‑50 (MQ=255) agagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAt < 1:274954‑M2/23‑1 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa < 1:218318‑M2/27‑1 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt < 1:3713507‑M2/29‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAttt < 1:1173026‑M2/30‑1 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtat < 1:2794913‑M2/32‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc > 1:1283907‑M2/16‑50 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt > 1:3870877‑M2/15‑50 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 1:3484880‑M2/37‑1 (MQ=255) aatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:1985424‑M2/13‑49 (MQ=255) aatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:506669‑M2/13‑49 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 1:2706364‑M2/39‑1 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTg > 1:983327‑M2/12‑49 (MQ=255) tgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaa < 1:1707589‑M2/40‑1 (MQ=255) tgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaa < 1:1590669‑M2/40‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaa < 1:1563735‑M2/41‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaa < 1:1459955‑M2/41‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:844227‑M2/9‑47 (MQ=255) aattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga < 1:1220903‑M2/43‑1 (MQ=255) aattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag > 1:3645468‑M2/8‑49 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaa < 1:251433‑M2/44‑1 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga > 1:3786479‑M2/7‑49 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:442380‑M2/45‑1 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaa > 1:171551‑M2/6‑49 (MQ=255) cccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaa < 1:3609302‑M2/46‑1 (MQ=255) cccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaa < 1:1740370‑M2/46‑1 (MQ=255) cccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaa < 1:2880335‑M2/46‑1 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa > 1:2702847‑M2/2‑48 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAaga < 1:1167464‑M2/49‑1 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAaga < 1:859973‑M2/49‑1 (MQ=255) aTGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAagag < 1:2570305/50‑1 (MQ=255) aTGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAagag < 1:2849746/50‑1 (MQ=255) | GTCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAG > NC_000913/683322‑683420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |