| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 53 [0] | [0] 53 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 51 (0.990) | 39/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCC > NC_000913/675503‑675600 | gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTccc < 1:2323766/49‑1 (MQ=255)gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTccc < 1:1867125/49‑1 (MQ=255)gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCa < 1:2247688‑M1/50‑2 (MQ=255)gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCa > 1:2238081‑M1/1‑49 (MQ=255)gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCa > 1:3134072‑M1/1‑49 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:648515‑M1/50‑3 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat > 1:3090007‑M1/1‑48 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:410534‑M1/50‑3 (MQ=255) tGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatgg > 1:116255‑M1/1‑46 (MQ=255) tGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatgg > 1:3359835‑M1/1‑46 (MQ=255) gATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:1283839‑M1/1‑45 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:591307‑M1/1‑44 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatgg < 1:3031487‑M1/48‑5 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc > 1:3125720‑M1/1‑39 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc > 1:1848553‑M1/1‑39 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc < 1:1033205‑M1/50‑12 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc < 1:3680874‑M1/50‑12 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct > 1:2996727‑M1/1‑38 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:2678963‑M1/50‑17 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat > 1:239608‑M1/1‑31 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatc < 1:239489‑M1/50‑21 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcca > 1:2881006‑M1/1‑28 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcca > 1:1139824‑M1/1‑28 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcc < 1:364328‑M1/49‑22 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccat < 1:274954‑M1/50‑24 (MQ=255) aaTATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgca < 1:218318‑M1/50‑28 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt < 1:3713507‑M1/50‑30 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattt < 1:1173026‑M1/49‑31 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttat < 1:2794913‑M1/49‑33 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatc > 1:1283907‑M1/1‑15 (MQ=255) cGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatct > 1:3870877‑M1/1‑14 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 1:3484880‑M1/50‑38 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:1985424‑M1/1‑12 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:506669‑M1/1‑12 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttga < 1:2706364‑M1/50‑40 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttg > 1:983327‑M1/1‑11 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 1:1590669‑M1/50‑41 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 1:1707589‑M1/50‑41 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaa < 1:1563735‑M1/49‑42 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaa < 1:1459955‑M1/49‑42 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:844227‑M1/1‑8 (MQ=255) aaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaaga < 1:1220903‑M1/50‑44 (MQ=255) aaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaag > 1:3645468‑M1/1‑7 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatttatatcttgaaagaa < 1:251433‑M1/50‑45 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatttatatcttgaaaga > 1:3786479‑M1/1‑6 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa < 1:442380‑M1/50‑46 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaa > 1:171551‑M1/1‑5 (MQ=255) cccatggcgagttctgcattatccattgcatttatatcttgaaagaaaa < 1:3609302‑M1/49‑47 (MQ=255) cccatggcgagttctgcattatccattgcatttatatcttgaaagaaaa < 1:1740370‑M1/49‑47 (MQ=255) cccatggcgagttctgcattatccattgcatttatatcttgaaagaaaa < 1:2880335‑M1/49‑47 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaaga < 1:1167464‑M1/50‑50 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaaga < 1:859973‑M1/50‑50 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaa > 1:2702847‑M1/1‑1 (MQ=255) | GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCC > NC_000913/675503‑675600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |