| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,388,889 | Δ9,734 bp | ycjG–[uspE] | ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH‑4, ynaJ, [uspE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1388889 | 1398622 | 9734 | 59 [0] | [0] 57 | ycjG–[uspE] | ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH‑4,ynaJ,[uspE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1388888 | 0 (0.000) | 57 (1.000) | 42/96 | 0.0 | 100% | intergenic (‑77/‑42) | tpx/ycjG | lipid hydroperoxide peroxidase/L‑Ala‑D/L‑Glu epimerase |
| ? | NC_000913 | 1398623 = | 0 (0.000) | intergenic (‑1/+151) | uspE/fnr | universal stress protein with a role cellular motility/DNA‑binding transcriptional dual regulator FNR | |||||
ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388840‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAG > NC_000913/1398623‑1398668 ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:2869646/1‑50ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT < 1:2901851/49‑1ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT < 1:2728968/49‑1 GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACA < 1:2859750/50‑1 GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:3193859/1‑48 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGG > 1:2789248/1‑50 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGG > 1:182584/1‑50 CACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGT > 1:2242356/1‑50 ACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTC > 1:4275434/1‑50 CCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCT < 1:3918666/50‑1 CCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCT < 1:2512489/50‑1 CTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTC > 1:1098326/1‑50 CTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTC > 1:2180177/1‑50 TTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA < 1:3289131/50‑1 TTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA > 1:2662415/1‑50 TTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA > 1:3844617/1‑49 TATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTAC > 1:3578343/1‑49 TATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTAC > 1:4449248/1‑49 ATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAA > 1:855084/1‑50 ATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACA < 1:2340893/49‑1 ATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACA < 1:2714951/49‑1 TGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAA < 1:3305845/49‑1 CTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAA < 1:2057778/50‑1 CTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAA > 1:3951119/1‑50 CTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAA > 1:4363798/1‑50 TAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC > 1:4806/1‑50 TAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC > 1:2203100/1‑50 TAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC > 1:226748/1‑50 AACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT > 1:3313521/1‑50 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTG < 1:4132069/50‑1 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTG > 1:908932/1‑50 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT < 1:1278531/49‑1 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC < 1:1265455/48‑1 CTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGT < 1:2811197/50‑1 GTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTC > 1:2852291/1‑49 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAA < 1:3172346/50‑1 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACG > 1:2370557/1‑50 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC < 1:4443641/49‑1 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC < 1:1938519/49‑1 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC < 1:353553/49‑1 ATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGC < 1:208738/50‑1 ATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGC < 1:3506727/50‑1 TAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCA < 1:3243863/50‑1 TAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACG > 1:966802/1‑48 ACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG < 1:3879058/49‑1 ACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG < 1:87847/49‑1 CACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTT > 1:528037/1‑50 CACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTT > 1:1207144/1‑50 CAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTG > 1:752977/1‑50 CAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTG < 1:1222516/50‑1 CAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAA < 1:4008532/50‑1 CAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAA > 1:1527488/1‑50 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAAT < 1:1889487/50‑1 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAAT < 1:680381/50‑1 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAAT > 1:1280058/1‑50 GCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAA < 1:199315/50‑1 GCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAA < 1:140648/50‑1 GCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:2997577/1‑49 TTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAG < 1:1887167/48‑1 ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388840‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAG > NC_000913/1398623‑1398668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |