| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 139 [0] | [0] 138 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 138 (1.210) | 72/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 138 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:6254413/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:6529848/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:7521173/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:1737071/50‑1 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:7666287/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:7618261/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:7801503/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:2423370/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:4075101/49‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:5271302/49‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:2075711/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1963002/1‑49 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:8026790/1‑49 TCATTCTCGTTTACGTTATCAGTCACTTTACATCAGAGATATACCATTCC < 1:4578893/50‑1 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:4102565/1‑50 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:8168987/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:3476038/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:4829657/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:1652342/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1050171/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:8466081/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:5792616/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:7330213/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:7777602/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 1:6895253/1‑49 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:38084/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:8589448/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:7366325/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:8512606/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:8249886/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:1964642/47‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:2065660/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC < 1:8323499/49‑1 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:2000621/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:315271/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:5648527/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:7413044/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:4940797/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:337453/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:3646921/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:6275726/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:766172/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:7865074/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:7548081/1‑49 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:4713195/1‑49 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:8018351/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:6425654/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:2631316/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:377979/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:5712221/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:5502428/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:126061/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG > 1:3473332/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:7203675/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:1677493/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGAACG > 1:3168657/1‑50 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:5535828/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:4343249/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:8150114/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:2989898/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:4989302/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:7220883/50‑1 TCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:7112410/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:282502/49‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:3950242/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:4277302/50‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:3297999/1‑50 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:6457740/1‑50 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:4328474/1‑50 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:4762/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3918312/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGG < 1:6315568/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:4258304/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA < 1:6044567/50‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:6740350/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:1846906/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:5654912/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:6597310/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:1559896/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:3369208/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:4344074/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:497612/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:2744453/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:2905947/1‑48 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:4392914/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:2502818/1‑50 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG < 1:7443200/50‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:238469/1‑50 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:4812104/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:4758961/50‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:518780/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:626995/50‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:3311251/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:1127758/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:3287159/1‑50 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:5244053/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 1:7292994/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 1:1725576/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 1:5836508/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:8028474/1‑49 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |