| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 139 [0] | [0] 138 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 138 (1.210) | 72/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 138 total aligned reads displayed.
CGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173399‑173496 | taatcattctcgtttacgttatcattcactttacatcagagatataccat > 1:6254413‑M2/50‑50 (MQ=255)taatcattctcgtttacgttatcattcactttacatcagagatataccat > 1:6529848‑M2/50‑50 (MQ=255)taatcattctcgtttacgttatcattcactttacatcagagatataccat > 1:7521173‑M2/50‑50 (MQ=255)taatcattctcgtttacgttatcattcactttacatcagagatataccat < 1:1737071‑M2/1‑1 (MQ=255) aatcattctcgtttacgttatcattcactttacatcagagatataccatt > 1:7666287‑M2/49‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccatt < 1:4075101‑M2/2‑1 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccatt < 1:5271302‑M2/2‑1 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccatt < 1:2075711‑M2/2‑1 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:7618261‑M2/48‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:7801503‑M2/48‑50 (MQ=255) atcattctcgtttacgttatcattcactttacatcagagatataccaTTc < 1:2423370‑M2/3‑1 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:1963002‑M2/47‑49 (MQ=255) tcattctcgtttacgttatcattcactttacatcagagatataccaTTc > 1:8026790‑M2/47‑49 (MQ=255) tcattctcgtttacgttatcagtcactttacatcagagatataccaTTcc < 1:4578893‑M2/4‑1 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:4102565‑M2/46‑50 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:8168987‑M2/46‑50 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCat < 1:3476038‑M2/6‑1 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCat < 1:4829657‑M2/6‑1 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:1652342‑M2/45‑49 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:1050171‑M2/44‑50 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:8466081‑M2/44‑50 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:5792616‑M2/44‑50 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata < 1:7330213‑M2/7‑1 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:7777602‑M2/43‑49 (MQ=255) ctcgtttacgttatcattcactttacatcagagatataccaTTCCatat > 1:6895253‑M2/42‑49 (MQ=255) cgtttacgttatcattcactttacatcagagatataccaTTCCATATAAc > 1:38084‑M2/40‑50 (MQ=255) cgtttacgttatcattcactttacatcagagatataccaTTCCATATAAc > 1:8589448‑M2/40‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:8512606‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:8249886‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCAtata < 1:1964642‑M2/9‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:7366325‑M2/10‑1 (MQ=255) ttacgttatcattcactttacatcagagatataccaTTCCATATAACGGc > 1:2065660‑M2/37‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGc < 1:8323499‑M2/14‑1 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGccc > 1:2000621‑M2/35‑50 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGccc > 1:315271‑M2/35‑50 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGcc < 1:5648527‑M2/15‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt > 1:7413044‑M2/34‑50 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt > 1:4940797‑M2/34‑50 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt > 1:337453‑M2/34‑50 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt > 1:3646921‑M2/34‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg < 1:6275726‑M2/18‑1 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:766172‑M2/33‑50 (MQ=255) gttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:7865074‑M2/33‑50 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:7548081‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:4713195‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:8018351‑M2/32‑49 (MQ=255) tatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa > 1:6425654‑M2/31‑50 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:5712221‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa < 1:5502428‑M2/20‑1 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc > 1:2631316‑M2/30‑50 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc > 1:377979‑M2/30‑50 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:7203675‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:1677493‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg < 1:126061‑M2/22‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg > 1:3473332‑M2/29‑50 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGAACg > 1:3168657‑M2/29‑50 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 1:5535828‑M2/28‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 1:4343249‑M2/27‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 1:8150114‑M2/27‑50 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt > 1:2989898‑M2/26‑50 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt > 1:4989302‑M2/26‑50 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:7220883‑M2/25‑1 (MQ=255) tcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg > 1:7112410‑M2/25‑50 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTgg < 1:282502‑M2/27‑1 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc > 1:3950242‑M2/22‑50 (MQ=255) ctttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGAc < 1:4277302‑M2/29‑1 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:3297999‑M2/21‑50 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:6457740‑M2/21‑50 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:4328474‑M2/21‑50 (MQ=255) ttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:4762‑M2/20‑49 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACgg < 1:6315568‑M2/31‑1 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:3918312‑M2/19‑50 (MQ=255) acatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGa > 1:4258304‑M2/18‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 1:6740350‑M2/17‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 1:1846906‑M2/17‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt < 1:5654912‑M2/33‑1 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa < 1:6044567‑M2/34‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:6597310‑M2/35‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 1:1559896‑M2/35‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:3369208‑M2/36‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:4344074‑M2/36‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:497612‑M2/15‑48 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:2744453‑M2/15‑48 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:2905947‑M2/15‑48 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:4392914‑M2/13‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 1:2502818‑M2/13‑50 (MQ=255) gagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCg < 1:7443200‑M2/39‑1 (MQ=255) agatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGt > 1:238469‑M2/11‑50 (MQ=255) agatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGt > 1:4812104‑M2/11‑50 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:4758961‑M2/43‑1 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa > 1:518780‑M2/8‑50 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:626995‑M2/43‑1 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa > 1:3311251‑M2/8‑50 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa > 1:1127758‑M2/8‑50 (MQ=255) accaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:3287159‑M2/5‑50 (MQ=255) ccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:5244053‑M2/4‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGa > 1:8028474‑M2/2‑49 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc < 1:7292994‑M2/49‑1 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc < 1:1725576‑M2/49‑1 (MQ=255) aTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc < 1:5836508‑M2/49‑1 (MQ=255) | CGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173399‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |