| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 380,020 | (G)10→7 | intergenic (‑139/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 380016 = | 18 (0.160) | 69 (0.710) | 38/84 | 0.4 | 84.5% | intergenic (‑135/+53) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| ? | NC_000913 | = 380012 | 10 (0.100) | intergenic (‑131/+57) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO | |||||
TGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/380071‑380016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccccTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCA < NC_000913/380012‑379964 TGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑C > 1:8041751/1‑50 GATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CC > 1:2081244/1‑50 ATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCC > 1:7105592/1‑50 ATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑C < 1:4291488/48‑1 CTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCC > 1:1380020/1‑50 CTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCC > 1:3423885/1‑50 CTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCC < 1:2276084/49‑1 CTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCC < 1:3820051/49‑1 CTTCTGCCGCCCGCTATCCGGGGAGGCCTTCCCTGCCGATTAG‑CCCCCC < 1:4884337/49‑1 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTC < 1:1080744/50‑1 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTC > 1:3882886/1‑50 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTC > 1:1003986/1‑50 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTC > 1:707652/1‑50 CCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTT > 1:160535/1‑50 CCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTT > 1:3382936/1‑50 CGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTT < 1:890625/50‑1 CGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTT < 1:3345602/50‑1 CGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTT < 1:2517623/50‑1 CGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTT < 1:4087243/50‑1 CGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTT > 1:2364081/1‑50 GCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG < 1:359791/50‑1 GCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG < 1:787448/50‑1 GCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG > 1:3378836/1‑50 CTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGT > 1:8387409/1‑50 CTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGT < 1:1497399/50‑1 CTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGT < 1:233372/50‑1 TATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTT > 1:7180281/1‑50 TATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTT > 1:3347301/1‑50 ATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTT > 1:7229852/1‑50 TCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTT > 1:8132692/1‑50 CCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTC > 1:3677553/1‑50 CGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCC < 1:2153350/50‑1 CGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCC < 1:7965486/50‑1 GGGGCGGCCTTCCTTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCC > 1:3485253/1‑49 GGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGA > 1:1597432/1‑50 GGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGAC < 1:311974/50‑1 GGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGAC < 1:1875096/50‑1 GGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGAC < 1:7284206/50‑1 GCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACC < 1:6677116/50‑1 CGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCA < 1:5154551/50‑1 CGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCA < 1:1650660/50‑1 GGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCAC < 1:7956495/50‑1 GGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCAC < 1:6870591/50‑1 GGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCA > 1:144553/1‑49 GGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCA > 1:7305289/1‑49 GCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACA > 1:3709388/1‑50 CCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACAT < 1:4134998/50‑1 CCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACAT < 1:7860866/50‑1 CCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACAT > 1:3090215/1‑50 CCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATT > 1:2055058/1‑50 CTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATT < 1:1781641/50‑1 CTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATT < 1:5736685/50‑1 CTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATT > 1:6069635/1‑50 CTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATT > 1:2567161/1‑50 TCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCA > 1:4711451/1‑50 CCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCAC > 1:5376981/1‑50 CCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTC < 1:4573651/48‑1 CCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTC < 1:1882468/48‑1 CCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTC < 1:130192/48‑1 CCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTC < 1:2315286/48‑1 CCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACC > 1:5278542/1‑50 CCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACC < 1:3448912/50‑1 CCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACC < 1:6361559/50‑1 CCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACC < 1:2836293/50‑1 CCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACC > 1:2431402/1‑50 CCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACC < 1:5184097/50‑1 CCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCAC < 1:3358303/49‑1 CCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCG > 1:6534560/1‑50 CTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCG < 1:1998619/50‑1 CTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCG > 1:6630595/1‑50 CCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGAT < 1:6362498/50‑1 CCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGAT < 1:6126106/50‑1 CCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGA < 1:6346471/49‑1 CCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGG < 1:898903/48‑1 CGATTAG‑CCCCCCCTTTCCGCTTTGTATTCCGACCACATTCACCGGATAA < 1:2261085/50‑1 GATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAA < 1:8461278/50‑1 GATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAA < 1:4417645/50‑1 GATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATA > 1:6394795/1‑49 CCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATT > 1:378543/1‑50 CCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATT < 1:4865314/50‑1 CCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTC < 1:2908270/50‑1 CCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTC < 1:763945/50‑1 CCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTC < 1:6107870/50‑1 CCCCCTTTCCTCTGTGTTTTCCGACCACATTCACCGGATAAATTTTATTC < 1:7814736/50‑1 CCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTC > 1:1232192/1‑49 CTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCA < 1:6617886/50‑1 CTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTC > 1:868205/1‑48 TGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/380071‑380016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccccTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCA < NC_000913/380012‑379964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |