| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 380,020 | (G)10→7 | intergenic (‑139/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 380016 = | 18 (0.160) | 69 (0.710) | 38/84 | 0.4 | 84.5% | intergenic (‑135/+53) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| ? | NC_000913 | = 380012 | 10 (0.100) | intergenic (‑131/+57) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO | |||||
CTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGG > NC_000913/379963‑380055 | cTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaaa < 1:7846809/50‑1 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAg < 1:6617886‑M2/50‑2 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgg > 1:1232192‑M2/1‑47 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAg > 1:868205‑M2/1‑47 (MQ=255) gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACACAGAGGAAAggggg < 1:7814736‑M2/50‑6 (MQ=255) gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg < 1:2908270‑M2/50‑6 (MQ=255) gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg < 1:6107870‑M2/50‑6 (MQ=255) gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg < 1:763945‑M2/50‑6 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggg < 1:4865314‑M2/50‑7 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggg > 1:378543‑M2/1‑44 (MQ=255) aaaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc > 1:4601494/1‑49 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc > 1:1470763/1‑48 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc < 1:3545980/49‑2 (MQ=255) aaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggct > 1:6045849/1‑47 (MQ=255) ttATCCGGTGAATGTGGTCGGAATACAAAGCGGAAAgggggggctaatcg < 1:2261085‑M2/50‑15 (MQ=255) ttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatc < 1:8461278‑M2/50‑15 (MQ=255) ttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatc < 1:4417645‑M2/50‑15 (MQ=255) tATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatc > 1:6394795‑M2/1‑35 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcgg < 1:6362498‑M2/50‑17 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcgg < 1:6126106‑M2/50‑17 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCg > 1:4362137/1‑50 (MQ=255) tCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcgg < 1:6346471‑M2/49‑17 (MQ=255) ccGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcgg < 1:898903‑M2/48‑17 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcag > 1:6630595‑M2/1‑31 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcag < 1:1998619‑M2/50‑20 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggctaatcggcagg > 1:6534560‑M2/1‑31 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagg < 1:2836293‑M2/50‑21 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagg < 1:6361559‑M2/50‑21 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagg < 1:5184097‑M2/50‑21 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagg > 1:2431402‑M2/1‑30 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagg < 1:3448912‑M2/50‑21 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggctaatcggcaggg > 1:5278542‑M2/1‑30 (MQ=255) gTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcaggg > 1:5376981‑M2/1‑29 (MQ=255) gTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagg < 1:3358303‑M2/49‑21 (MQ=255) tGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcaggga > 1:4711451‑M2/1‑28 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcaggg < 1:130192‑M2/48‑22 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcaggg < 1:1882468‑M2/48‑22 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcaggg < 1:4573651‑M2/48‑22 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcaggg < 1:2315286‑M2/48‑22 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaag < 1:5736685‑M2/50‑25 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaag > 1:6069635‑M2/1‑26 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaag < 1:1781641‑M2/50‑25 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaag > 1:2567161‑M2/1‑26 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAAgggggggctaatcggcagggaagg > 1:2055058‑M2/1‑26 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaagg > 1:3090215‑M2/1‑25 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaagg < 1:4134998‑M2/50‑26 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaagg < 1:7860866‑M2/50‑26 (MQ=255) tgtgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggc > 1:3709388‑M2/1‑24 (MQ=255) gtgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggcc < 1:7956495‑M2/50‑28 (MQ=255) gtgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggcc < 1:6870591‑M2/50‑28 (MQ=255) tgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccg < 1:1650660‑M2/50‑29 (MQ=255) tgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccg < 1:5154551‑M2/50‑29 (MQ=255) tgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggcc > 1:144553‑M2/1‑22 (MQ=255) tgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggcc > 1:7305289‑M2/1‑22 (MQ=255) tgGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgcc < 1:4533653/50‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgc < 1:1519820/49‑1 (MQ=255) ggTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgc < 1:6677116‑M2/50‑30 (MQ=255) gTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgcc < 1:311974‑M2/50‑31 (MQ=255) gTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgcc < 1:1875096‑M2/50‑31 (MQ=255) gTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgcc < 1:7284206‑M2/50‑31 (MQ=255) gTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgccg < 1:7689520/49‑1 (MQ=255) tCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccc > 1:1597432‑M2/1‑19 (MQ=255) ggAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccg < 1:2153350‑M2/50‑34 (MQ=255) ggAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccg < 1:7965486‑M2/50‑34 (MQ=255) ggAAAACAAAGAGGAAAggggggggctaatcggcaaggaaggccgcccc > 1:3485253‑M2/1‑17 (MQ=255) gAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccgg > 1:3677553‑M2/1‑16 (MQ=255) gAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg > 1:7300056/1‑50 (MQ=255) aaaaCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccgga > 1:8132692‑M2/1‑15 (MQ=255) aaaCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggat > 1:7229852‑M2/1‑14 (MQ=255) aaCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggata > 1:3347301‑M2/1‑13 (MQ=255) aaCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggata > 1:7180281‑M2/1‑13 (MQ=255) aCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatag > 1:8387409‑M2/1‑12 (MQ=255) aCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatag < 1:1497399‑M2/50‑39 (MQ=255) aCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatag < 1:233372‑M2/50‑39 (MQ=255) cAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagc < 1:787448‑M2/50‑40 (MQ=255) cAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagc > 1:3378836‑M2/1‑11 (MQ=255) cAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagc < 1:359791‑M2/50‑40 (MQ=255) cAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg > 1:3182014/1‑50 (MQ=255) aaaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcg < 1:2517623‑M2/50‑41 (MQ=255) aaaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcg < 1:4087243‑M2/50‑41 (MQ=255) aaaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcg > 1:2364081‑M2/1‑10 (MQ=255) aaaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcg < 1:3345602‑M2/50‑41 (MQ=255) aaaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcg < 1:890625‑M2/50‑41 (MQ=255) aaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgg > 1:160535‑M2/1‑9 (MQ=255) aaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgg > 1:3382936‑M2/1‑9 (MQ=255) gagGAAAggggggggctaatcggcagggaaggccgccccggatagcgggc > 1:707652‑M2/1‑7 (MQ=255) gagGAAAggggggggctaatcggcagggaaggccgccccggatagcgggc > 1:3882886‑M2/1‑7 (MQ=255) gagGAAAggggggggctaatcggcagggaaggccgccccggatagcgggc < 1:1080744‑M2/50‑44 (MQ=255) gagGAAAggggggggctaatcggcagggaaggccgccccggatagcgggc > 1:1003986‑M2/1‑7 (MQ=255) | CTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGG > NC_000913/379963‑380055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |