| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 380,020 | (G)10→7 | intergenic (‑139/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 380016 = | 18 (0.160) | 69 (0.710) | 38/84 | 0.4 | 84.5% | intergenic (‑135/+53) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| ? | NC_000913 | = 380012 | 10 (0.100) | intergenic (‑131/+57) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO | |||||
AGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAG > NC_000913/379967‑380065 | tggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaag < 1:6617886‑M1/1‑1 (MQ=255) gagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaagg > 1:1232192‑M1/48‑49 (MQ=255) gagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaag > 1:868205‑M1/48‑48 (MQ=255) gaataaaatttatccggtgaatgtggtcggaaaacacagaggaaaggggg < 1:7814736‑M1/5‑1 (MQ=255) gaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaggggg < 1:6107870‑M1/5‑1 (MQ=255) gaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaggggg < 1:2908270‑M1/5‑1 (MQ=255) gaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaggggg < 1:763945‑M1/5‑1 (MQ=255) aataaaatttatccggtgaatgtggtcggaaaacaaagaggaaagggggg > 1:378543‑M1/45‑50 (MQ=255) aataaaatttatccggtgaatgtggtcggaaaacaaagaggaaagggggg < 1:4865314‑M1/6‑1 (MQ=255) aaaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc > 1:4601494/1‑49 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc > 1:1470763/1‑48 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc < 1:3545980/49‑2 (MQ=255) aaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggct > 1:6045849/1‑47 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGG‑CTAATCg > 1:4362137/1‑50 (MQ=255) ttatccggtgaatgtggtcggaatacaaagcggaaaGGGGGGG‑CTAATCg < 1:2261085‑M1/14‑1 (MQ=255) ttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATc < 1:8461278‑M1/14‑1 (MQ=255) ttatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATc < 1:4417645‑M1/14‑1 (MQ=255) tatccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATc > 1:6394795‑M1/36‑49 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCgg < 1:6362498‑M1/16‑1 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCgg < 1:6126106‑M1/16‑1 (MQ=255) tccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCgg < 1:6346471‑M1/16‑1 (MQ=255) ccggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCgg < 1:898903‑M1/16‑1 (MQ=255) cggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAg < 1:1998619‑M1/19‑1 (MQ=255) cggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAg > 1:6630595‑M1/32‑50 (MQ=255) cggtgaatgtggtcggaaaacaaagaggaaaGGGGGGG‑CTAATCGGCAgg > 1:6534560‑M1/32‑50 (MQ=255) ggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAgg > 1:2431402‑M1/31‑50 (MQ=255) ggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAgg < 1:3448912‑M1/20‑1 (MQ=255) ggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAgg < 1:6361559‑M1/20‑1 (MQ=255) ggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAgg < 1:2836293‑M1/20‑1 (MQ=255) ggtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAgg < 1:5184097‑M1/20‑1 (MQ=255) ggtgaatgtggtcggaaaacaaagaggaaaGGGGGGG‑CTAATCGGCAggg > 1:5278542‑M1/31‑50 (MQ=255) gtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAggg > 1:5376981‑M1/30‑50 (MQ=255) gtgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAgg < 1:3358303‑M1/20‑1 (MQ=255) tgaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGa > 1:4711451‑M1/29‑50 (MQ=255) gaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAggg < 1:2315286‑M1/21‑1 (MQ=255) gaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAggg < 1:4573651‑M1/21‑1 (MQ=255) gaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAggg < 1:1882468‑M1/21‑1 (MQ=255) gaatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAggg < 1:130192‑M1/21‑1 (MQ=255) aatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAg < 1:5736685‑M1/24‑1 (MQ=255) aatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAg > 1:2567161‑M1/27‑50 (MQ=255) aatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAg < 1:1781641‑M1/24‑1 (MQ=255) aatgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAg > 1:6069635‑M1/27‑50 (MQ=255) aatgtggtcggaaaacaaagaggaaaGGGGGGG‑CTAATCGGCAGGGAAgg > 1:2055058‑M1/27‑50 (MQ=255) tgGTCGGAAAACAAAGAGGAAA‑GGGGGGGGG‑CTAATCGGCAGGGAAGgcc < 1:4533653/50‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAAA‑GGGGGGGGG‑CTAATCGGCAGGGAAGgc < 1:1519820/49‑1 (MQ=255) atgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAgg < 1:7860866‑M1/25‑1 (MQ=255) atgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAgg > 1:3090215‑M1/26‑50 (MQ=255) atgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAgg < 1:4134998‑M1/25‑1 (MQ=255) tgtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgc > 1:3709388‑M1/25‑50 (MQ=255) gtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgcc < 1:6870591‑M1/27‑1 (MQ=255) gtggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgcc < 1:7956495‑M1/27‑1 (MQ=255) gTCGGAAAACAAAGAGGAAA‑GGGGGGGGG‑CTAATCGGCAGGGAAGgccg < 1:7689520/49‑1 (MQ=255) tggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgccg < 1:1650660‑M1/28‑1 (MQ=255) tggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgccg < 1:5154551‑M1/28‑1 (MQ=255) tggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgcc > 1:7305289‑M1/23‑49 (MQ=255) tggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgcc > 1:144553‑M1/23‑49 (MQ=255) ggtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgccgc < 1:6677116‑M1/29‑1 (MQ=255) gtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgccgcc < 1:1875096‑M1/30‑1 (MQ=255) gtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgccgcc < 1:7284206‑M1/30‑1 (MQ=255) gtcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGgccgcc < 1:311974‑M1/30‑1 (MQ=255) tcggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGccc > 1:1597432‑M1/20‑50 (MQ=255) gAAAACAAAGAGGAAA‑GGGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCg > 1:7300056/1‑50 (MQ=255) ggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg < 1:7965486‑M1/33‑1 (MQ=255) ggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg < 1:2153350‑M1/33‑1 (MQ=255) ggaaaacaaagaggaaaGGGGGGGGCTAATCGGCAAGGAAGGCCGcccc > 1:3485253‑M1/18‑49 (MQ=255) gaaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg > 1:3677553‑M1/17‑50 (MQ=255) aaaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:8132692‑M1/16‑50 (MQ=255) cAAAGAGGAAA‑GGGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAg > 1:3182014/1‑50 (MQ=255) aaacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGAt > 1:7229852‑M1/15‑50 (MQ=255) aacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 1:3347301‑M1/14‑50 (MQ=255) aacaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 1:7180281‑M1/14‑50 (MQ=255) acaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg < 1:233372‑M1/38‑1 (MQ=255) acaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg > 1:8387409‑M1/13‑50 (MQ=255) acaaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg < 1:1497399‑M1/38‑1 (MQ=255) caaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgc < 1:787448‑M1/39‑1 (MQ=255) caaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgc > 1:3378836‑M1/12‑50 (MQ=255) caaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgc < 1:359791‑M1/39‑1 (MQ=255) aaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg < 1:4087243‑M1/40‑1 (MQ=255) aaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg < 1:890625‑M1/40‑1 (MQ=255) aaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg < 1:3345602‑M1/40‑1 (MQ=255) aaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg < 1:2517623‑M1/40‑1 (MQ=255) aaagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg > 1:2364081‑M1/11‑50 (MQ=255) aagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 1:3382936‑M1/10‑50 (MQ=255) aagaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 1:160535‑M1/10‑50 (MQ=255) gaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:707652‑M1/8‑50 (MQ=255) gaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:1003986‑M1/8‑50 (MQ=255) gaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:3882886‑M1/8‑50 (MQ=255) gaggaaaGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc < 1:1080744‑M1/43‑1 (MQ=255) aagggggggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:4216885/3‑47 (MQ=255) aagggggggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:1420680/3‑47 (MQ=255) agggtgggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 1:1847715/49‑1 (MQ=255) agggggggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg > 1:6232203/2‑49 (MQ=255) agggggggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 1:1334218/49‑1 (MQ=255) gggggggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg > 1:3066535/1‑48 (MQ=255) gggggggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:7888977/50‑1 (MQ=255) gggggggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:3832574/50‑1 (MQ=255) GGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAg > 1:3423885‑M1/1‑50 (MQ=255) GGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAg > 1:1380020‑M1/1‑50 (MQ=255) | AGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAG > NC_000913/379967‑380065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |