| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 112 [0] | [0] 116 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 105 (0.960) | 62/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 113 total aligned reads displayed.
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:5884895/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:3367811/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:4567433/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:7684524/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:1829904/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:2258159/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT < 1:5630248/50‑1 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:2833214/1‑50 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC < 1:4216607/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:3213944/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:4378171/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:7520953/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:3797854/1‑50 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:5192749/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:5146988/1‑49 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA > 1:4331871/1‑50 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA < 1:5967021/50‑1 TGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:4605652/1‑50 GGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:5334064/1‑49 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:1532717/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:7588991/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:6368235/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:2069653/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:2420969/48‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:5242108/48‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:5524743/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:7074499/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:3453663/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:5983101/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:5010426/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC < 1:613527/50‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC > 1:7420420/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:7061970/49‑1 TTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT > 1:6762773/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:7591987/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:5916287/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:1615998/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT > 1:2829104/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT < 1:1918229/49‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:2115472/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:4507732/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAA < 1:7133423/49‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAA < 1:2009306/49‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAA < 1:1542087/49‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:6355698/1‑50 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:2658843/1‑50 gcTTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:8109150/3‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:5916503/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:4169269/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:833410/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:1230527/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:7358932/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:3838122/49‑1 TTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGC < 1:508968/50‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:6777237/1‑49 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:279393/1‑49 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:2374285/49‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:1932627/1‑49 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 1:3949626/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 1:8498885/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 1:4973044/49‑1 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:2598842/1‑49 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:6577552/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:7926669/49‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG < 1:8311348/50‑1 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGC < 1:5527817/50‑1 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2820978/1‑49 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:861465/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:1138252/1‑48 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:8095912/1‑50 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:6839683/1‑50 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:4417563/1‑50 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:5716341/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT < 1:289923/49‑1 AATACATTGAACGTCTACACTTGCTCCTGTAAACCGCTCAGGAGCAGTA < 1:6121247/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:1737573/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:78549/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:3996050/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:7836578/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:2937692/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:8497137/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:1788897/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:5174954/49‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:151770/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:1022055/1‑49 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:1183351/1‑49 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA > 1:8200457/1‑50 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAct > 1:6555667/1‑48 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:3555277/1‑50 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:8373103/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:624986/50‑1 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:6153268/1‑50 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:7815987/1‑50 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCT < 1:2565361/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA < 1:1333503/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:196006/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:2793246/1‑49 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:8437499/50‑1 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:6045081/50‑1 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > 1:6366202/1‑49 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |