| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 112 [0] | [0] 116 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 105 (0.960) | 62/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 116 total aligned reads displayed.
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:3367811‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:4567433‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:7684524‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:1829904‑M2/1‑1 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt < 1:5630248‑M2/3‑1 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:2833214‑M2/47‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:4216607‑M2/4‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:7520953‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:3797854‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:4378171‑M2/45‑50 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTac < 1:5192749‑M2/7‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:5146988‑M2/44‑49 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:5967021‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca > 1:4331871‑M2/43‑50 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:4605652‑M2/41‑50 (MQ=255) ggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:5334064‑M2/40‑49 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 1:2053812‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 1:2069653‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 1:6368235‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:5242108‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:2420969‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa < 1:3046834‑M2/12‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 1:5524743‑M2/38‑50 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 1:7074499‑M2/38‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:3453663‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:5010426‑M2/37‑50 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt < 1:7061970‑M2/14‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc < 1:613527‑M2/15‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc < 1:7670625‑M2/15‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc > 1:7420420‑M2/36‑50 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc > 1:2665654‑M2/35‑50 (MQ=255) ttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt > 1:6762773‑M2/34‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:5916287‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:7591987‑M2/33‑50 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:1615998‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:5951861‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg < 1:5271705‑M2/18‑1 (MQ=255) tattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGt > 1:2829104‑M2/31‑49 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa < 1:2115472‑M2/22‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaa < 1:1542087‑M2/21‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaa < 1:2009306‑M2/21‑1 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaa < 1:7133423‑M2/21‑1 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:2658843‑M2/28‑50 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:6355698‑M2/28‑50 (MQ=255) gcttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:8109150‑M2/27‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:4169269‑M2/27‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:5916503‑M2/27‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:3838122‑M2/24‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:1230527‑M2/26‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:833410‑M2/26‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:7358932‑M2/26‑50 (MQ=255) ttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGc < 1:8241654‑M2/26‑1 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:6777237‑M2/23‑49 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 1:7022039‑M2/27‑1 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:1932627‑M2/23‑49 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 1:2374285‑M2/27‑1 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:279393‑M2/23‑49 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:4973044‑M2/28‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:4046620‑M2/28‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:3949626‑M2/28‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:8498885‑M2/28‑1 (MQ=255) gagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:2598842‑M2/20‑49 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGa < 1:6577552‑M2/32‑1 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg < 1:8311348‑M2/33‑1 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:2820978‑M2/17‑49 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:861465‑M2/16‑48 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:1138252‑M2/16‑48 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:8095912‑M2/15‑50 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:4417563‑M2/15‑50 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:5716341‑M2/13‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 1:289923‑M2/37‑1 (MQ=255) aatacattgaaCGTCTACACTTGCTCCTGTAAACCGCTCAGGAGCAGTa < 1:6121247‑M2/38‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:8497137‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:78549‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:7836578‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:1737573‑M2/39‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:1788897‑M2/39‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:2937692‑M2/39‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:5174954‑M2/38‑1 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:1022055‑M2/10‑49 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:151770‑M2/41‑1 (MQ=255) acattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg > 1:1183351‑M2/9‑49 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGaa > 1:8200457‑M2/8‑50 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAtgact > 1:6555667‑M2/7‑48 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:3555277‑M2/7‑50 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc < 1:624986‑M2/45‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:2565361‑M2/46‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:6153268‑M2/4‑50 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:7815987‑M2/4‑50 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:160483‑M2/4‑50 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa < 1:1333503‑M2/47‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:196006‑M2/3‑49 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc > 1:4627931‑M2/2‑49 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc > 1:6366202‑M2/2‑49 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 1:6045081‑M2/49‑1 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACa < 1:8437499‑M2/49‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa > 1:1506776/1‑50 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 1:8487472/50‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 1:4594366/50‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 1:8510637/50‑1 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |