| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 109 [0] | [0] 108 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 108 (0.950) | 62/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 108 total aligned reads displayed.
AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204302‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC > NC_000913/2236718‑2236764 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:5794596/1‑49AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:588492/1‑49AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:6026671/1‑49AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:295753/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 1:1887972/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:7294359/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTG < 1:2410028/49‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:5331917/50‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:6133346/50‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 1:3174755/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:282482/50‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:7314122/50‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 1:254340/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:8276457/50‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:2647093/1‑49 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:5661707/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:8229822/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:772730/1‑49 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:2603393/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:7054949/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:327821/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:8222073/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:6212425/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG > 1:4556409/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG > 1:4167706/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:5059291/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG > 1:1113904/1‑50 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:3219948/1‑50 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:5684347/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:6552347/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:4792140/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:8219209/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:474382/1‑49 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:1902973/1‑49 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG < 1:7870886/49‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA < 1:341277/50‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA > 1:7824379/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:4598810/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:6404848/1‑50 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:5073571/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:3071166/1‑49 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:329145/1‑50 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCgc < 1:931737/50‑3 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCAC < 1:5650458/50‑1 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:4755989/50‑1 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:1457466/50‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT < 1:5143363/50‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT < 1:1669263/50‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:2715152/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:3235620/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:401088/1‑50 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:1302615/50‑1 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 1:890648/50‑1 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:3068873/50‑1 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:6330378/50‑1 GCAACGTCCCAATGGCCTGGCTTATTGACCGAATGCGGACCACATTCACA > 1:4765199/1‑50 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA > 1:1333659/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 1:1844254/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 1:2907877/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 1:7148178/1‑50 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:8215007/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:1723667/1‑50 TCCCAATGGCCTGGATTATTGACCGAATGCGGGCCACATTCACATCATTT < 1:745467/50‑1 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT > 1:819596/1‑50 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 1:4994949/50‑1 CCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC > 1:8570946/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:4312190/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:5921309/49‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:7092845/49‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:4414301/49‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:4602895/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:7740006/1‑49 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:3355952/1‑49 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:1983878/1‑49 AATGGCCTGGATTATTGACCGAATGCGGACCGCATTCACATCATTTCTTA < 1:3695519/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:5896408/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:7564954/1‑50 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:4707258/1‑50 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:8531085/1‑50 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:761256/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:7228730/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG > 1:3011667/1‑50 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:6749295/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG > 1:6741581/1‑50 GGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC > 1:5605342/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 1:751972/49‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:199313/50‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:529132/50‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:6747781/1‑50 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:7935093/1‑50 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:5656797/1‑49 GGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA > 1:8028966/1‑50 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA < 1:2227543/49‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGT < 1:4552926/48‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:6594335/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:7645700/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:7429627/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:3109067/50‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC < 1:3396587/49‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC < 1:3637991/49‑1 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204302‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC > NC_000913/2236718‑2236764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |