| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 109 [0] | [0] 108 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 108 (0.950) | 62/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 108 total aligned reads displayed.
CTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC > NC_000913/2236670‑2236764 | aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:5794596‑M2/49‑49 (MQ=255)aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:588492‑M2/49‑49 (MQ=255)aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:6026671‑M2/49‑49 (MQ=255)aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:295753‑M2/49‑49 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTg < 1:2410028‑M2/2‑1 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa < 1:1887972‑M2/3‑1 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:7294359‑M2/48‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 1:5331917‑M2/4‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 1:6133346‑M2/4‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 1:3174755‑M2/47‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 1:282482‑M2/4‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 1:7314122‑M2/4‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 1:254340‑M2/47‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 1:8276457‑M2/4‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:2647093‑M2/45‑49 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:5661707‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:8229822‑M2/45‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 1:772730‑M2/44‑49 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:2603393‑M2/43‑50 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:7054949‑M2/43‑50 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:327821‑M2/43‑50 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:8222073‑M2/43‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:6212425‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg > 1:4556409‑M2/41‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg > 1:4167706‑M2/41‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:5059291‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg > 1:1113904‑M2/41‑50 (MQ=255) tggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 1:3219948‑M2/40‑50 (MQ=255) tggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 1:5684347‑M2/40‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:8219209‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:6552347‑M2/39‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:4792140‑M2/39‑50 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:474382‑M2/38‑49 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:1902973‑M2/38‑49 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg < 1:7870886‑M2/12‑1 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:341277‑M2/14‑1 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa > 1:7824379‑M2/37‑50 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:4598810‑M2/36‑50 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:6404848‑M2/36‑50 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:5073571‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:3071166‑M2/35‑49 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:329145‑M2/34‑50 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGgaccgc < 1:931737‑M2/18‑3 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcac < 1:5650458‑M2/18‑1 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:4755989‑M2/19‑1 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:1457466‑M2/19‑1 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt < 1:5143363‑M2/21‑1 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt < 1:1669263‑M2/21‑1 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:2715152‑M2/30‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:3235620‑M2/30‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:401088‑M2/30‑50 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTc < 1:1302615‑M2/22‑1 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca < 1:890648‑M2/23‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:3068873‑M2/24‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:6330378‑M2/24‑1 (MQ=255) gcaacgtcccaatggcctggcttatTGACCGAATGCGGACCACATTcaca > 1:4765199‑M2/26‑50 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca > 1:1333659‑M2/26‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat > 1:1844254‑M2/22‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat > 1:2907877‑M2/22‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat > 1:7148178‑M2/22‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt < 1:8215007‑M2/30‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:1723667‑M2/21‑50 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGGCCACATTCACATCAttt < 1:745467‑M2/31‑1 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt > 1:819596‑M2/20‑50 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 1:4994949‑M2/31‑1 (MQ=255) cccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc > 1:8570946‑M2/19‑50 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc < 1:7092845‑M2/32‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc < 1:5921309‑M2/32‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc < 1:4414301‑M2/32‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:4312190‑M2/18‑50 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCtt < 1:4602895‑M2/34‑1 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:1983878‑M2/17‑49 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:7740006‑M2/17‑49 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:3355952‑M2/17‑49 (MQ=255) aatggcctggattatTGACCGAATGCGGACCGCATTCACATCATTTCTTa < 1:3695519‑M2/35‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa > 1:4707258‑M2/16‑50 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:5896408‑M2/35‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa > 1:7564954‑M2/16‑50 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa > 1:8531085‑M2/16‑50 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:761256‑M2/36‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 1:7228730‑M2/37‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg > 1:3011667‑M2/14‑50 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 1:6749295‑M2/37‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg > 1:6741581‑M2/14‑50 (MQ=255) ggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc > 1:5605342‑M2/13‑50 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc < 1:751972‑M2/38‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc < 1:529132‑M2/40‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc < 1:199313‑M2/40‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 1:6747781‑M2/11‑50 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:7935093‑M2/10‑50 (MQ=255) tggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:5656797‑M2/9‑49 (MQ=255) ggattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa > 1:8028966‑M2/8‑50 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGt < 1:4552926‑M2/42‑1 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa < 1:2227543‑M2/43‑1 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt < 1:6594335‑M2/45‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt < 1:7645700‑M2/46‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt < 1:7429627‑M2/46‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt < 1:3109067‑M2/46‑1 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc < 1:3396587‑M2/47‑1 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc < 1:3637991‑M2/47‑1 (MQ=255) | CTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC > NC_000913/2236670‑2236764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |