| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 109 [0] | [0] 108 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 108 (0.950) | 62/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 109 total aligned reads displayed.
ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATT > NC_000913/2204300‑2204396 | aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:295753‑M1/1‑48 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:6026671‑M1/1‑48 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:588492‑M1/1‑48 (MQ=255) aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:5794596‑M1/1‑48 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:7294359‑M1/1‑47 (MQ=255) aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:1887972‑M1/50‑4 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac < 1:6133346‑M1/50‑5 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac < 1:282482‑M1/50‑5 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac > 1:254340‑M1/1‑46 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac < 1:7314122‑M1/50‑5 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac > 1:3174755‑M1/1‑46 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac < 1:8276457‑M1/50‑5 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac < 1:5331917‑M1/50‑5 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc > 1:8229822‑M1/1‑44 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc > 1:2647093‑M1/1‑44 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg > 1:772730‑M1/1‑43 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:2603393‑M1/1‑42 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:7054949‑M1/1‑42 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:327821‑M1/1‑42 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:8222073‑M1/1‑42 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg > 1:4167706‑M1/1‑40 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg < 1:7927451‑M1/50‑11 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg > 1:4556409‑M1/1‑40 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg < 1:6212425‑M1/50‑11 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg < 1:5059291‑M1/50‑11 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg > 1:1113904‑M1/1‑40 (MQ=255) tGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc > 1:3219948‑M1/1‑39 (MQ=255) tGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc > 1:5684347‑M1/1‑39 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg > 1:4792140‑M1/1‑38 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:8219209‑M1/49‑12 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg > 1:474382‑M1/1‑37 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg < 1:7870886‑M1/49‑13 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg > 1:1902973‑M1/1‑37 (MQ=255) tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga < 1:341277‑M1/50‑15 (MQ=255) tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga > 1:7824379‑M1/1‑36 (MQ=255) ccGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:6404848‑M1/1‑35 (MQ=255) ccGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:4598810‑M1/1‑35 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:5073571‑M1/1‑34 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:3071166‑M1/1‑34 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca > 1:329145‑M1/1‑33 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccgc < 1:931737‑M1/50‑19 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccac < 1:5650458‑M1/50‑19 (MQ=255) tCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccaca < 1:1457466‑M1/50‑20 (MQ=255) tCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccaca < 1:4755989‑M1/50‑20 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt < 1:5143363‑M1/50‑22 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt < 1:1669263‑M1/50‑22 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 1:2715152‑M1/1‑29 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 1:3235620‑M1/1‑29 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacat < 1:4469731‑M1/49‑21 (MQ=255) ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattc < 1:1302615‑M1/50‑23 (MQ=255) gcgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattca < 1:890648‑M1/50‑24 (MQ=255) cgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcac < 1:3068873‑M1/50‑25 (MQ=255) cgcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcac < 1:6330378‑M1/50‑25 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca > 1:1333659‑M1/1‑25 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatca > 1:6066956‑M1/1‑22 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat > 1:2907877‑M1/1‑21 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat > 1:7148178‑M1/1‑21 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat > 1:1844254‑M1/1‑21 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt < 1:8215007‑M1/50‑31 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt > 1:1723667‑M1/1‑20 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcgggccacattcacatcattt < 1:745467‑M1/50‑32 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcattt > 1:819596‑M1/1‑19 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcattt < 1:4994949‑M1/50‑32 (MQ=255) cccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc > 1:8570946‑M1/1‑18 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:4312190‑M1/1‑17 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct < 1:3215374‑M1/50‑34 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc < 1:4414301‑M1/49‑33 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc < 1:7092845‑M1/49‑33 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc < 1:5921309‑M1/49‑33 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctt < 1:4602895‑M1/50‑35 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:7740006‑M1/1‑16 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:1983878‑M1/1‑16 (MQ=255) cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct > 1:3355952‑M1/1‑16 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccgcattcacatcatttctta < 1:3695519‑M1/50‑36 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta > 1:8531085‑M1/1‑15 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta > 1:4707258‑M1/1‑15 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta > 1:7564954‑M1/1‑15 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta < 1:5896408‑M1/50‑36 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac < 1:761256‑M1/50‑37 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg < 1:7228730‑M1/50‑38 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg < 1:6749295‑M1/50‑38 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg > 1:3011667‑M1/1‑13 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg > 1:6741581‑M1/1‑13 (MQ=255) ggCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc > 1:5605342‑M1/1‑12 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc < 1:751972‑M1/49‑39 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc < 1:529132‑M1/50‑41 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc < 1:199313‑M1/50‑41 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc > 1:6747781‑M1/1‑10 (MQ=255) cTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg > 1:7935093‑M1/1‑9 (MQ=255) tGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg > 1:7222383‑M1/1‑8 (MQ=255) tGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg > 1:5656797‑M1/1‑8 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat < 1:5085910‑M1/50‑45 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgta < 1:2227543‑M1/49‑44 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgt < 1:4552926‑M1/48‑43 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt < 1:6594335‑M1/50‑46 (MQ=255) ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt < 1:7645700‑M1/50‑47 (MQ=255) tattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 1:953672‑M1/1‑3 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:2507805‑M1/49‑48 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:3396587‑M1/49‑48 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:3637991‑M1/49‑48 (MQ=255) | ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATT > NC_000913/2204300‑2204396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |