| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 114 [0] | [0] 113 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 112 (0.980) | 67/98 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 112 total aligned reads displayed.
CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACA > NC_000913/2290181‑2290228 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:2441364/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:3869239/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:4693171/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT < 1:7514805/50‑1 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:4997990/1‑48 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG < 1:7446950/50‑1 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG > 1:4733845/1‑50 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG > 1:6230183/1‑50 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC > 1:6596019/1‑50 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT > 1:166319/1‑50 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT > 1:3718732/1‑50 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT > 1:1990515/1‑50 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT < 1:6830252/50‑1 GACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:5036023/1‑49 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 1:6117205/49‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT < 1:8082442/50‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT > 1:8336944/1‑50 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT > 1:2732636/1‑50 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT < 1:4098254/50‑1 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC > 1:1484668/1‑50 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC < 1:6305551/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:4091304/1‑50 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:5250864/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:1345543/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:2830006/1‑50 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:5610718/1‑50 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:1865721/50‑1 ATCACAGCCTGTTTAGTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCT < 1:8076890/50‑1 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA < 1:2111799/50‑1 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA < 1:703202/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG < 1:7249598/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG < 1:3678323/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:6303724/1‑49 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA < 1:2893182/50‑1 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAA < 1:288347/50‑1 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA > 1:7986378/1‑49 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA > 1:4994467/1‑49 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA < 1:5523346/50‑1 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:189866/1‑50 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:5548741/1‑50 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT < 1:4244453/50‑1 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:5464107/1‑50 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:5820147/1‑49 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:5766030/1‑49 CTGTTTATTTCCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT < 1:6835931/50‑1 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:6136968/1‑50 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAAT < 1:424028/50‑1 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA < 1:7964593/49‑1 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:6574308/1‑50 TATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT < 1:5149764/49‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGGAATTAATTGC < 1:5316523/49‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCT < 1:6310870/50‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGC < 1:6037041/49‑1 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG < 1:5872696/49‑1 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG < 1:4179808/49‑1 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT > 1:3824081/1‑49 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT < 1:877956/49‑1 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT < 1:7731896/49‑1 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT < 1:5814086/49‑1 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT < 1:3588994/49‑1 TGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA > 1:3040827/1‑49 GTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:857531/1‑49 GTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:3787353/1‑49 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:1571276/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:6241291/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:1506149/47‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:2688832/47‑1 TATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:6614810/1‑50 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 1:4765011/49‑1 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:1162053/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:2004086/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:3941808/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:384867/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 1:16254/49‑1 CAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT > 1:7031871/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:2455576/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:6210998/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:5413509/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT < 1:3499803/49‑1 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG > 1:1601106/1‑50 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG > 1:6395038/1‑50 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG > 1:4817281/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:7654629/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:7250100/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:1246347/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 1:3612626/1‑50 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 1:2105697/1‑50 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:4033113/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 1:4704038/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 1:3996151/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 1:3971496/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 1:8300698/50‑1 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAC < 1:7070792/50‑1 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAC < 1:6664034/50‑1 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:59382/1‑49 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:5506630/1‑49 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACA < 1:6236522/49‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACA < 1:7995817/49‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACA < 1:3254564/49‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:915777/1‑47 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACA > NC_000913/2290181‑2290228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |