| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 114 [0] | [0] 113 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 110 (0.960) | 64/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
Only 100 of 110 total aligned reads displayed.
TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > NC_000913/2476179‑2476226 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 1:7639881/50‑1TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 1:5340887/50‑1 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAG < 1:412743/50‑1 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAG < 1:5722145/50‑1 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA < 1:8324395/49‑1 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA < 1:4024110/49‑1 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG < 1:5629827/50‑1 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:7270232/50‑1 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:5828475/50‑1 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCC < 1:3815914/50‑1 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:3695974/1‑49 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:7002274/1‑49 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:218132/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:5155657/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA < 1:4098876/50‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4581761/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCAT < 1:8514804/49‑1 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:7719302/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:5315865/1‑49 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACA < 1:2311918/50‑1 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:7831513/1‑48 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:6097362/1‑48 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:5896666/1‑50 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG < 1:3301793/50‑1 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:731929/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC < 1:6752092/50‑1 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:725838/1‑50 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:2441403/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:4423091/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:8492095/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 1:6025597/49‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:6297914/1‑49 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGTCTCA > 1:6579057/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:4695549/1‑50 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:2154249/50‑1 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:5520852/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:612893/50‑1 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:4061717/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:3755243/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:4107136/1‑50 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:1383242/1‑49 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:2370392/1‑49 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:1238047/1‑49 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:7794930/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:500104/1‑50 ATTTTACCCACCGGATTTTTACCCTTGAGCCATACAGCCTCACACTCGAT < 1:1674549/50‑1 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:1698584/1‑50 TTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:8379760/1‑49 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:8411573/1‑48 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:533462/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:1528719/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:5546101/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:3895445/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:8169491/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG < 1:2565831/49‑1 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG < 1:3047886/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:2849719/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:6954691/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:3981253/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:5874072/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC < 1:3516603/49‑1 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:1626067/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:1822040/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:8491475/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 1:3238405/50‑1 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 1:5084231/50‑1 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG > 1:8150023/1‑50 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 1:2197775/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:3280014/1‑49 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCA < 1:2435881/50‑1 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCA < 1:4694023/50‑1 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCA < 1:3683309/50‑1 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:3384502/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:5360718/1‑50 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT > 1:4571140/1‑50 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT > 1:4854575/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 1:6725217/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACCCGATGAGGCCTGTCAGTT < 1:7019520/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:748367/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:5994733/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 1:160156/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:3351978/50‑1 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 1:1857077/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:7708026/1‑50 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT < 1:1465261/49‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:4646626/1‑49 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:5587855/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT < 1:5433383/49‑1 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT < 1:3572320/49‑1 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA > 1:7723739/1‑49 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA > 1:8055482/1‑49 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA > 1:8129575/1‑49 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA > 1:2543004/1‑49 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA < 1:5942371/49‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA > 1:5400461/1‑49 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:7722516/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:7477761/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA < 1:6853368/50‑1 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:6471319/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:6059072/1‑50 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > NC_000913/2476179‑2476226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |