| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 113 [0] | [0] 112 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 93 (0.980) | 57/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
Only 100 of 129 total aligned reads displayed.
TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:4331409/1‑50TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:1350655/1‑50TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:708114/1‑50 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:3704722/1‑49 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:5908417/1‑49 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:8361127/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:3057553/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:498378/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:7371544/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT < 1:1119865/48‑1 ACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:2908977/1‑48 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:345510/1‑50 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:7353679/1‑50 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAA < 1:4107878/49‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:6176512/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:7135775/1‑49 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:3270125/1‑49 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA < 1:5279333/50‑1 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA < 1:6813406/50‑1 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA < 1:1042981/50‑1 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAA < 1:5238006/49‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT < 1:1280479/50‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT > 1:4217830/1‑50 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:8575434/1‑50 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:4074725/1‑50 GAACAATGTGGTCGTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC < 1:1377157/50‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCG < 1:2696821/50‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCG < 1:6407736/50‑1 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGA < 1:878914/50‑1 CAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAG > 1:6682543/1‑50 CAATGCGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAG > 1:7230030/1‑50 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT < 1:572365/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTG < 1:4761722/50‑1 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA < 1:4576597/50‑1 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA > 1:1636980/1‑50 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATT < 1:2869150/50‑1 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATT > 1:2260658/1‑50 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT < 1:3141331/49‑1 GGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:6066055/1‑50 GGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:7536981/1‑50 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT < 1:7745579/49‑1 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA > 1:549032/1‑50 CTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC > 1:2585209/1‑50 TTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACC > 1:5005503/1‑50 TTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG > 1:8287040/1‑50 TTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG > 1:890429/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT > 1:7487697/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT > 1:211806/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG < 1:5853386/49‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG < 1:6489199/49‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACC < 1:3036964/48‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC < 1:3286223/47‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC < 1:3611978/47‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:4317410/49‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:3650110/49‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:1465540/49‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:3786226/49‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA < 1:1377217/50‑1 GTTGCATAAGTCGTTCCCACAAGGAGGAAATGCGAGTGATTTCACCGTC < 1:8584705/49‑1 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC > 1:8572007/1‑50 TTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC > 1:2590662/1‑50 TCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG > 1:1203485/1‑50 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGC < 1:4600013/50‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGC < 1:5809989/50‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG < 1:3558153/49‑1 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:5913686/1‑50 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:2967369/1‑50 AAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:686442/1‑49 AAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:8001568/1‑49 AAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:643278/1‑49 AAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:7394148/1‑49 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACA < 1:193837/50‑1 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCAC > 1:403161/1‑49 GTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA > 1:1799822/1‑50 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:2133485/49‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:7555703/1‑49 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:7329021/49‑1 TTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGA < 1:3417822/50‑1 TTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGA < 1:3271464/50‑1 TCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT > 1:6792223/1‑50 TCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT > 1:302687/1‑50 TCCCTCAGGAAGGAAATGCGAGCGATTTCACCGTCACCGGCACAACCGAT > 1:2708785/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:887681/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:2636626/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT < 1:1727800/49‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC < 1:4502410/49‑1 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG > 1:1745210/1‑50 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG < 1:2712565/50‑1 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG > 1:4783146/1‑50 CAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:1399034/1‑49 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA < 1:3426091/50‑1 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCC < 1:5561059/49‑1 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:2467202/50‑1 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA > 1:8139341/1‑49 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA > 1:5530705/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAA < 1:8389475/50‑1 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:8045592/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:7550051/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:6071663/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:1433049/1‑49 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |