| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 113 [0] | [0] 112 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 93 (0.980) | 57/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
Only 100 of 113 total aligned reads displayed.
CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCG > NC_000913/2558649‑2558747 | cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:7353679‑M1/1‑50 (MQ=255)cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:345510‑M1/1‑50 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGg < 1:6176512‑M1/50‑2 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:3270125‑M1/1‑49 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGga < 1:1042981‑M1/50‑3 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGga < 1:6813406‑M1/50‑3 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGga < 1:6289221‑M1/50‑3 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGga < 1:5279333‑M1/50‑3 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaa < 1:5238006‑M1/49‑4 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaat > 1:4217830‑M1/1‑45 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaat < 1:1280479‑M1/50‑6 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaa < 1:7731525‑M1/49‑5 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:4074725‑M1/1‑43 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:8575434‑M1/1‑43 (MQ=255) gAACAATGTGGTCGTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc < 1:1377157‑M1/50‑8 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcg < 1:6407736‑M1/50‑9 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcg < 1:2696821‑M1/50‑9 (MQ=255) aCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcga < 1:878914‑M1/50‑10 (MQ=255) cAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgag > 1:6682543‑M1/1‑40 (MQ=255) cAATGCGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgag > 1:7230030‑M1/1‑40 (MQ=255) aaTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagt > 1:3378598‑M1/1‑39 (MQ=255) aaTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagt < 1:572365‑M1/50‑12 (MQ=255) aTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtg < 1:4761722‑M1/50‑13 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtga < 1:4576597‑M1/50‑14 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtga > 1:1636980‑M1/1‑37 (MQ=255) gtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgat > 1:5523208‑M1/1‑36 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatt < 1:2869150‑M1/50‑16 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgat < 1:3141331‑M1/49‑15 (MQ=255) ggTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt > 1:7536981‑M1/1‑34 (MQ=255) ggTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt > 1:6066055‑M1/1‑34 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt < 1:7745579‑M1/49‑17 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttca < 1:352689‑M1/50‑19 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttca > 1:549032‑M1/1‑32 (MQ=255) cTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac > 1:4373361‑M1/1‑31 (MQ=255) cTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac > 1:2786270‑M1/1‑31 (MQ=255) cTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac > 1:2585209‑M1/1‑31 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc > 1:5216341‑M1/1‑30 (MQ=255) ttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccg > 1:8287040‑M1/1‑29 (MQ=255) ttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccg > 1:890429‑M1/1‑29 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt > 1:211806‑M1/1‑28 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt > 1:7487697‑M1/1‑28 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccg < 1:5853386‑M1/49‑22 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccg < 1:6489199‑M1/49‑22 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc < 1:3036964‑M1/48‑21 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac < 1:3611978‑M1/47‑20 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac < 1:3286223‑M1/47‑20 (MQ=255) aGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt < 1:3650110‑M1/49‑23 (MQ=255) aGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt < 1:3786226‑M1/49‑23 (MQ=255) gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtca < 1:1377217‑M1/50‑25 (MQ=255) gTTGCATAAGTCGTTCCCACAAGGAGgaaatgcgagtgatttcaccgtc < 1:8584705‑M1/49‑24 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcac > 1:8572007‑M1/1‑25 (MQ=255) ttCATACGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc > 1:6934158‑M1/1‑24 (MQ=255) ttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc > 1:2590662‑M1/1‑24 (MQ=255) tCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg > 1:1203485‑M1/1‑23 (MQ=255) tCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg > 1:7405939‑M1/1‑23 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg < 1:4100224‑M1/49‑28 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggc < 1:4600013‑M1/50‑30 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgg > 1:7339950‑M1/1‑21 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgg > 1:6685795‑M1/1‑21 (MQ=255) tAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:5913686‑M1/1‑20 (MQ=255) tAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:2967369‑M1/1‑20 (MQ=255) aaGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:7394148‑M1/1‑19 (MQ=255) aaGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:8001568‑M1/1‑19 (MQ=255) aaGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:686442‑M1/1‑19 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcaca < 1:193837‑M1/50‑33 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcac > 1:403161‑M1/1‑18 (MQ=255) gTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaa > 1:1799822‑M1/1‑17 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:4640580‑M1/1‑14 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 1:7329021‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 1:2133485‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 1:2988044‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:7555703‑M1/1‑14 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:5980162‑M1/1‑14 (MQ=255) ttCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccga < 1:3271464‑M1/50‑38 (MQ=255) ttCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccga < 1:3417822‑M1/50‑38 (MQ=255) ttCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccga > 1:2596995‑M1/1‑13 (MQ=255) tCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgat > 1:302687‑M1/1‑12 (MQ=255) tCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgat > 1:6792223‑M1/1‑12 (MQ=255) tCCCTCAGGAAGgaaatgcgagcgatttcaccgtcaccggcacaaccgat > 1:2708785‑M1/1‑12 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc > 1:8618157‑M1/1‑11 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc > 1:887681‑M1/1‑11 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc > 1:2636626‑M1/1‑11 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgat < 1:1727800‑M1/49‑39 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc > 1:3760801‑M1/1‑10 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc < 1:4502410‑M1/49‑40 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg > 1:4783146‑M1/1‑9 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg > 1:1745210‑M1/1‑9 (MQ=255) cAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgc > 1:1399034‑M1/1‑7 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca < 1:2388876‑M1/50‑45 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca < 1:3426091‑M1/50‑45 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcc < 1:5561059‑M1/49‑44 (MQ=255) ggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa < 1:2467202‑M1/50‑46 (MQ=255) ggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca > 1:8139341‑M1/1‑5 (MQ=255) ggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca > 1:5530705‑M1/1‑5 (MQ=255) gaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:1659369‑M1/1‑4 (MQ=255) aaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaa < 1:8389475‑M1/50‑48 (MQ=255) aaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:8045592‑M1/1‑3 (MQ=255) aaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:6071663‑M1/1‑3 (MQ=255) aaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:1433049‑M1/1‑3 (MQ=255) ggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaag < 1:1328387‑M1/50‑50 (MQ=255) | CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCG > NC_000913/2558649‑2558747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |