| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 113 [0] | [0] 112 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 93 (0.980) | 57/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
Only 100 of 112 total aligned reads displayed.
GCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565441‑2565537 | ttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagga < 1:1042981‑M2/2‑1 (MQ=255)ttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagga < 1:5279333‑M2/2‑1 (MQ=255)ttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagga < 1:6289221‑M2/2‑1 (MQ=255)ttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagga < 1:6813406‑M2/2‑1 (MQ=255) gccgaacaatgtggtctttagtttcataagtcgttccctcaggaaggaa < 1:5238006‑M2/3‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGaaa < 1:7731525‑M2/4‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt < 1:1280479‑M2/5‑1 (MQ=255) ccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAAt > 1:4217830‑M2/46‑50 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGc > 1:4074725‑M2/44‑50 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGc > 1:8575434‑M2/44‑50 (MQ=255) gaacaatgtggtcgttagtttcataagtcgttccctcaggaagGAAATGc < 1:1377157‑M2/7‑1 (MQ=255) aacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCg < 1:6407736‑M2/8‑1 (MQ=255) aacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCg < 1:2696821‑M2/8‑1 (MQ=255) acaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGa < 1:878914‑M2/9‑1 (MQ=255) caatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAg > 1:6682543‑M2/41‑50 (MQ=255) caatgcggtctttagtttcataagtcgttccctcaggaagGAAATGCGAg > 1:7230030‑M2/41‑50 (MQ=255) aatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGt < 1:572365‑M2/11‑1 (MQ=255) atgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTg < 1:4761722‑M2/12‑1 (MQ=255) tgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGa < 1:4576597‑M2/13‑1 (MQ=255) gtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAt > 1:5523208‑M2/37‑50 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAtt > 1:2260658‑M2/36‑50 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAtt < 1:2869150‑M2/15‑1 (MQ=255) tggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAt < 1:3141331‑M2/14‑1 (MQ=255) ggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt > 1:7536981‑M2/35‑50 (MQ=255) ggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt > 1:6066055‑M2/35‑50 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGAttt < 1:7745579‑M2/16‑1 (MQ=255) tctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtca > 1:549032‑M2/33‑50 (MQ=255) tctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtca < 1:352689‑M2/18‑1 (MQ=255) ctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac > 1:2585209‑M2/32‑50 (MQ=255) ctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac > 1:4373361‑M2/32‑50 (MQ=255) tttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcacc > 1:5216341‑M2/31‑50 (MQ=255) tttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcacc > 1:5005503‑M2/31‑50 (MQ=255) ttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccg > 1:8287040‑M2/30‑50 (MQ=255) ttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccg > 1:890429‑M2/30‑50 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt > 1:211806‑M2/29‑50 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt > 1:7487697‑M2/29‑50 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccg < 1:5853386‑M2/21‑1 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccg < 1:6489199‑M2/21‑1 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcacc < 1:3036964‑M2/20‑1 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac < 1:3611978‑M2/19‑1 (MQ=255) tagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcac < 1:3286223‑M2/19‑1 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt < 1:3650110‑M2/22‑1 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt < 1:3786226‑M2/22‑1 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt < 1:1465540‑M2/22‑1 (MQ=255) agtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgt < 1:4317410‑M2/22‑1 (MQ=255) gtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtca < 1:1377217‑M2/24‑1 (MQ=255) gttgcataagtcgttcccacaaggagGAAATGCGAGTGATTtcaccgtc < 1:8584705‑M2/23‑1 (MQ=255) tttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcac > 1:8572007‑M2/26‑50 (MQ=255) ttcatacgtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc > 1:6934158‑M2/25‑50 (MQ=255) ttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcacc > 1:2590662‑M2/25‑50 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg > 1:7405939‑M2/24‑50 (MQ=255) tcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg > 1:1203485‑M2/24‑50 (MQ=255) cataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtcaccg < 1:4100224‑M2/27‑1 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg > 1:7339950‑M2/22‑49 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg > 1:6685795‑M2/22‑49 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCgg < 1:3558153‑M2/28‑1 (MQ=255) ataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGc < 1:5809989‑M2/29‑1 (MQ=255) taagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:2967369‑M2/21‑50 (MQ=255) taagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:5913686‑M2/21‑50 (MQ=255) aagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:643278‑M2/20‑49 (MQ=255) aagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:8001568‑M2/20‑49 (MQ=255) aagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGca > 1:7394148‑M2/20‑49 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcaca < 1:193837‑M2/32‑1 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcac > 1:403161‑M2/19‑49 (MQ=255) agtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGcac > 1:3236077‑M2/19‑49 (MQ=255) gtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACaa > 1:1799822‑M2/18‑50 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc > 1:7555703‑M2/15‑49 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:7329021‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:2988044‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:2133485‑M2/35‑1 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc > 1:5980162‑M2/15‑49 (MQ=255) gttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc > 1:4640580‑M2/15‑49 (MQ=255) ttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa < 1:3271464‑M2/37‑1 (MQ=255) ttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa < 1:3417822‑M2/37‑1 (MQ=255) ttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGa > 1:2596995‑M2/14‑50 (MQ=255) tccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt > 1:302687‑M2/13‑50 (MQ=255) tccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt > 1:6792223‑M2/13‑50 (MQ=255) tccctcaggaagGAAATGCGAGCGATTTCACCGTCACCGGCACAACCGAt > 1:2708785‑M2/13‑50 (MQ=255) ccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt < 1:1727800‑M2/38‑1 (MQ=255) ccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc > 1:8618157‑M2/12‑50 (MQ=255) ccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc > 1:887681‑M2/12‑50 (MQ=255) ccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc > 1:2636626‑M2/12‑50 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATcc > 1:3760801‑M2/11‑50 (MQ=255) cctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATc < 1:4502410‑M2/39‑1 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:4783146‑M2/10‑50 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg < 1:2712565‑M2/41‑1 (MQ=255) ctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg > 1:1745210‑M2/10‑50 (MQ=255) caggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGc > 1:1399034‑M2/8‑49 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGcc < 1:5561059‑M2/43‑1 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa < 1:3426091‑M2/44‑1 (MQ=255) aggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa < 1:8490743‑M2/44‑1 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa < 1:2467202‑M2/45‑1 (MQ=255) ggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCa > 1:8139341‑M2/6‑49 (MQ=255) gaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaa > 1:1659369‑M2/5‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:6071663‑M2/4‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:8045592‑M2/4‑49 (MQ=255) aagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa > 1:1433049‑M2/4‑49 (MQ=255) gGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAg < 1:1328387‑M2/49‑1 (MQ=255) gaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:8255226/1‑48 (MQ=255) gaaATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaaaa > 1:7435378/1‑48 (MQ=255) | GCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565441‑2565537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |