| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,362,162 | Δ5,481 bp | [yhcA]–[yhcF] | [yhcA], yhcD, yhcE, insH‑10, yhcE, [yhcF] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3362162 | 3367642 | 5481 | 129 [0] | [0] 123 | [yhcA]–[yhcF] | [yhcA],yhcD,yhcE,insH‑10,yhcE,[yhcF] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3362161 | 0 (0.000) | 122 (1.070) | 64/98 | 0.0 | 100% | coding (50/675 nt) | yhcA | putative fimbrial chaperone YhcA |
| ? | NC_000913 | 3367643 = | 0 (0.000) | intergenic (+1/‑184) | yhcF/yhcG | DUF1120 domain‑containing protein YhcF/DUF1016 domain‑containing protein YhcG | |||||
Only 100 of 122 total aligned reads displayed.
TGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3362113‑3362161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG > NC_000913/3367643‑3367691 TGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACT < 1:4390918/50‑1 GCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACT > 1:7314222/1‑49 GCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACT > 1:5323492/1‑49 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 1:4351877/50‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 1:8369623/50‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 1:526534/50‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 1:6992978/50‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 1:5853928/50‑1 AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAA < 1:261121/50‑1 AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAA > 1:5272783/1‑50 AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAA > 1:6113558/1‑50 AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAA < 1:7399103/50‑1 GACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAAT < 1:4795383/50‑1 GACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAAT < 1:1134796/50‑1 GACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAAT < 1:3374119/50‑1 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG < 1:6098415/50‑1 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG > 1:7693925/1‑50 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG < 1:5143146/50‑1 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG < 1:8470862/50‑1 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG < 1:941035/50‑1 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG > 1:1287665/1‑50 CACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGC > 1:6099233/1‑50 CACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGC < 1:6151364/50‑1 ACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCC > 1:6256652/1‑50 ACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCC > 1:4191034/1‑50 CATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCG > 1:1450038/1‑50 ATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGG < 1:2664476/50‑1 ATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCG > 1:5079665/1‑49 TTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA < 1:3479734/50‑1 TTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA < 1:6295616/50‑1 TTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA < 1:1129805/50‑1 TACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA > 1:4115242/1‑49 ACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGAC < 1:5564703/49‑1 ACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA > 1:5677349/1‑48 ATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGG < 1:8343975/50‑1 ATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAG > 1:1821411/1‑49 ATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAG > 1:1923348/1‑49 ATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAG > 1:7926483/1‑49 TTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAG > 1:3926006/1‑48 TCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAG > 1:3369588/1‑50 TCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAG > 1:7308674/1‑50 TCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAG > 1:598108/1‑50 CACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAG > 1:744486/1‑49 CACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAG > 1:3234569/1‑49 CACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAG > 1:5388186/1‑49 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGT < 1:8244550/49‑1 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGT < 1:6784662/49‑1 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGT < 1:516049/49‑1 CTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 1:7885814/1‑50 CTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 1:3219550/1‑50 TGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 1:5101015/1‑49 TGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 1:4699132/1‑49 TGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 1:3544243/1‑49 TATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTAT < 1:589983/50‑1 TATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACT < 1:4318895/48‑1 TATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACT < 1:5758252/48‑1 TATTTATAACAACACCAATGAATACTAACAATGCCGGACAGGAGTACT < 1:7580323/48‑1 TTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATC < 1:1665576/49‑1 TTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGCACTAT > 1:3797467/1‑48 TTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAG > 1:2554229/1‑50 TATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGG > 1:1837002/1‑50 TATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAG < 1:7070652/49‑1 TATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAG < 1:5714513/49‑1 ATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGG > 1:1607464/1‑49 TAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCA > 1:1200826/1‑50 AACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCAT > 1:1303217/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 1:1047787/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 1:5304990/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 1:26953/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 1:6444021/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 1:6484431/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 1:8057627/1‑50 CAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTC < 1:7473367/50‑1 AACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCG < 1:5731008/50‑1 AACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCG < 1:5334806/50‑1 ACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGT < 1:6152236/50‑1 ACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGT < 1:3553683/50‑1 CATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTT < 1:6091765/50‑1 CATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTT > 1:8168489/1‑50 TCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTT > 1:8527618/1‑49 CAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA > 1:226929/1‑50 AATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA > 1:1299087/1‑49 AATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA > 1:883909/1‑49 AATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA < 1:7476479/49‑1 TGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATAC > 1:5156359/1‑50 TGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATAC < 1:6669525/50‑1 GAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATAC > 1:495579/1‑49 GAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATAC > 1:3576237/1‑49 AATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGA > 1:746778/1‑50 ATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGAT > 1:1557520/1‑50 ATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGAT > 1:674226/1‑50 ATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGAT > 1:3911952/1‑50 TACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATC < 1:6766103/50‑1 TACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATC > 1:1877518/1‑50 TACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATC > 1:1130471/1‑50 TACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATC < 1:4148994/50‑1 ACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCG > 1:2127316/1‑50 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG < 1:2382305/50‑1 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG < 1:298808/50‑1 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCG < 1:6793787/49‑1 TGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3362113‑3362161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG > NC_000913/3367643‑3367691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |