| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 117 [0] | [0] 108 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 108 (0.950) | 64/98 | 0.0 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 117 total aligned reads displayed.
TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 | tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:5031610/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:4882019/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:6761934/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:6792875/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:7543972/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:2892867/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:2583463/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:2405971/50‑1 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:1437760‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:8113634‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 1:8611695‑M1/49‑2 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 1:6501822‑M1/49‑2 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 1:6930386‑M1/49‑2 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa > 1:2486109‑M1/1‑46 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 1:1761198‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:2173464‑M1/49‑6 (MQ=255) aTGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgc < 1:5539330‑M1/50‑8 (MQ=255) aTGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgc < 1:417944‑M1/50‑8 (MQ=255) aTGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgc > 1:1105168‑M1/1‑43 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgca < 1:5826241‑M1/50‑11 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgca < 1:4250151‑M1/50‑11 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc > 1:2984654‑M1/1‑40 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa < 1:8214452‑M1/50‑12 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatg < 1:2597766‑M1/50‑14 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:1099636‑M1/1‑37 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:406451‑M1/1‑37 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:7448089‑M1/1‑37 (MQ=255) aTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatga < 1:7814036‑M1/50‑15 (MQ=255) aTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatga < 1:7397012‑M1/50‑15 (MQ=255) aTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatga > 1:2806343‑M1/1‑36 (MQ=255) gcgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac > 1:2841934‑M1/1‑34 (MQ=255) gcgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac > 1:2544774‑M1/1‑34 (MQ=255) gcgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac > 1:5248313‑M1/1‑34 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga < 1:4863460‑M1/50‑18 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga > 1:3644001‑M1/1‑33 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga < 1:5798218‑M1/50‑18 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:5652242‑M1/49‑17 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:8429059‑M1/49‑17 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:3264756‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:4833368‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:6881276‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:2779112‑M1/1‑31 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:8529404‑M1/1‑31 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:6298385‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:7787504‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:2723465‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:6544619‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc < 1:3287305‑M1/50‑23 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:7986856‑M1/1‑27 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:6173884‑M1/50‑25 (MQ=255) aaaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc > 1:7734596‑M1/1‑24 (MQ=255) aaaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc > 1:1332802‑M1/1‑24 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc > 1:8515441‑M1/1‑23 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:1882572‑M1/49‑27 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:4625659‑M1/49‑27 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat < 1:2284479‑M1/48‑26 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:502709‑M1/50‑29 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:3396907‑M1/50‑29 (MQ=255) gcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctc > 1:618545‑M1/1‑21 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:1065395‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:4971490‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:3496873‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:3499898‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:3915945‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct > 1:4479‑M1/1‑20 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct > 1:1355684‑M1/1‑20 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg > 1:3668071‑M1/1‑19 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg > 1:7021683‑M1/1‑19 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 1:2122711‑M1/1‑17 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt < 1:7852460‑M1/50‑35 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt < 1:856318‑M1/50‑35 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg < 1:1867972‑M1/50‑36 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg < 1:4164190‑M1/50‑36 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:5391001‑M1/1‑14 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:51983‑M1/1‑14 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:2127288‑M1/1‑14 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacaatcatccatcctctgcttgc > 1:5011378‑M1/1‑14 (MQ=255) tCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcc < 1:3860538‑M1/50‑38 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccgtcctctgcttgcca < 1:7140022‑M1/49‑39 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:7358231‑M1/1‑11 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 1:4084066‑M1/50‑40 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 1:204077‑M1/50‑40 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 1:3427091‑M1/49‑39 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 1:3136789‑M1/49‑39 (MQ=255) gCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:1052988‑M1/1‑10 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagta < 1:3044611‑M1/50‑42 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:489995‑M1/1‑8 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 1:4962705‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:2066674‑M1/1‑7 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:6512018‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:8107242‑M1/50‑45 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 1:1719584‑M1/1‑5 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc > 1:4532464‑M1/1‑4 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:3191741‑M1/1‑3 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:2134034‑M1/1‑3 (MQ=255) gtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:2064670‑M1/1‑2 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 1:5484900‑M1/1‑1 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 1:5260381‑M1/1‑1 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgc < 1:3201644‑M1/49‑49 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgc < 1:4520432‑M1/49‑49 (MQ=255) | TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |