| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 15 (0.140) | 164 (1.500) | 84/98 | 0.0 | 91.4% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 16 (0.150) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 164 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 2:3833138/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 2:1125690/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:4936987/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:1965576/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:3394752/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1144882/1‑49 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 2:2600363/1‑49 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:2447834/1‑49 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:5121801/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 2:2060427/49‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 2:1166827/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:4630161/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:264241/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 2:5014110/1‑49 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 2:3017348/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:322123/49‑1 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 1:915954/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 2:3133971/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 2:4188990/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:3237954/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:3118804/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:3042055/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:2411774/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:1942560/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3537958/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 2:4747888/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 2:153010/1‑50 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:2832279/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:4307630/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:2116416/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC < 1:4806828/49‑1 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:2235912/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 2:1468565/49‑1 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 2:103831/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:5069573/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:1613329/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 2:4222075/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:2688950/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 2:2756767/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 2:3431512/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:4344600/1‑49 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:2577990/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 2:5329190/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:2373558/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:4926322/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 2:3582309/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:1265837/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:718216/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG > 2:893223/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG > 2:2354723/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 2:3851716/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 2:126513/49‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:5319920/1‑50 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 2:4662717/1‑50 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:3942227/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 2:2662767/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 2:474599/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC < 2:3284974/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 2:3796389/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 2:3686415/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:3754437/50‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA < 1:2244335/50‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA < 1:2944037/50‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:924908/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:1283819/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 2:817547/49‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:3645567/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:2014519/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:5307551/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:1589941/48‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:1077011/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 2:2808413/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:275756/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:1421130/1‑49 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 2:3278034/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:4494399/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 2:4541543/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:408389/1‑48 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 2:1208637/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 2:4542382/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 2:5117044/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 2:3353862/49‑1 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG > 1:839988/1‑50 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG > 1:4615827/1‑50 GAGATATACCATTCCATATAACGGCCCTGCACGCCTGGACGGATAAAGCG > 1:3394083/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:478829/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:5383574/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:4319466/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 2:1134711/1‑49 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 2:48003/50‑1 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:749351/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG < 1:421223/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG > 1:4399857/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 2:4282844/49‑1 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:4847280/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:4714382/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:2541445/1‑50 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 2:690726/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 1:5234332/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:3876978/1‑49 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |