| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 15 (0.140) | 164 (1.500) | 84/98 | 0.0 | 91.4% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 16 (0.150) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 181 total aligned reads displayed.
ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCG > NC_000913/167434‑167532 | ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa < 2:4010554/50‑1 (MQ=255) taatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCaa > 2:3671499/1‑50 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt > 1:4823589‑M1/1‑49 (MQ=255) aaTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt > 1:4870673‑M1/1‑48 (MQ=255) atCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATg < 1:4380608/50‑1 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc < 1:4936987‑M1/50‑4 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc < 2:3833138‑M1/50‑4 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcc < 1:3394752‑M1/50‑5 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:1144882‑M1/1‑46 (MQ=255) cATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGgc > 2:4988804/1‑50 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 2:2060427‑M1/49‑6 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 2:1103227‑M1/1‑43 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata < 2:1166827‑M1/50‑8 (MQ=255) tctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 2:5014110‑M1/1‑42 (MQ=255) tctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 2:1262104‑M1/1‑42 (MQ=255) tctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 2:3017348‑M1/1‑42 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat > 2:3282816‑M1/1‑41 (MQ=255) cGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac > 2:3133971‑M1/1‑39 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 2:3557327‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 1:3237954‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac < 1:4281350‑M1/49‑12 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 2:4747888‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 2:153010‑M1/1‑37 (MQ=255) ttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc > 1:2832279‑M1/1‑36 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc > 1:2116416‑M1/1‑35 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc > 1:914857‑M1/1‑35 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc > 1:2658063‑M1/1‑35 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCaa > 2:3725515/1‑49 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccc > 1:2417885‑M1/1‑34 (MQ=255) cGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccct > 1:1411755‑M1/1‑33 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 2:3431512‑M1/1‑32 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgt < 1:3881557‑M1/50‑20 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgt < 1:5382683‑M1/50‑20 (MQ=255) tATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta > 1:315645‑M1/1‑30 (MQ=255) tATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta > 2:271519‑M1/1‑30 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac > 1:2373558‑M1/1‑29 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta < 1:718216‑M1/49‑21 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta < 1:1265837‑M1/49‑21 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCt > 1:4201725/1‑50 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg > 2:2354723‑M1/1‑28 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg > 2:893223‑M1/1‑28 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:4693142‑M1/49‑22 (MQ=255) tCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCt > 1:288321/1‑49 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 1:305423‑M1/1‑27 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 2:4662717‑M1/1‑27 (MQ=255) cATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCt > 2:1332620/1‑48 (MQ=255) aTTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCa < 2:2391485/49‑1 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 2:4609304‑M1/50‑26 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:3754437‑M1/50‑26 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:931133‑M1/50‑26 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct > 2:3796389‑M1/1‑25 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:2160252‑M1/50‑26 (MQ=255) cACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:4333616‑M1/1‑23 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgga < 1:2944037‑M1/50‑29 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgga > 1:924908‑M1/1‑22 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgga < 1:2244335‑M1/50‑29 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgg < 1:1283819‑M1/49‑28 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgg < 2:817547‑M1/49‑28 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:2014519‑M1/1‑21 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:3417160‑M1/1‑20 (MQ=255) ttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:1512029‑M1/1‑19 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 2:4210100‑M1/1‑18 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgg < 1:3545516‑M1/49‑32 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:5307551‑M1/48‑31 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:1589941‑M1/48‑31 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 1:275756‑M1/1‑16 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat < 2:2995411‑M1/49‑34 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat < 2:2808413‑M1/49‑34 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 1:1077011‑M1/1‑16 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 2:1575757‑M1/1‑16 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat < 1:5082687‑M1/49‑34 (MQ=255) aTCAGAGATATACCAttccatataacggccctgtacgcctggacggataa < 2:1294993‑M1/50‑36 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggataaa < 1:4494399‑M1/50‑37 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggataaa < 2:4541543‑M1/50‑37 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggata > 1:408389‑M1/1‑14 (MQ=255) cAGAGATATACCAttccatataacggccctgtacgcctggacggataaag > 2:4703898‑M1/1‑13 (MQ=255) cAGAGATATACCAttccatataacggccctgtacgcctggacggataaag > 1:2600065‑M1/1‑13 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 2:263399‑M1/50‑39 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaag < 2:3353862‑M1/49‑38 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagcg > 1:4615827‑M1/1‑11 (MQ=255) gagaTATACCAttccatataacggccctgcacgcctggacggataaagcg > 1:3394083‑M1/1‑11 (MQ=255) agaTATACCAttccatataacggccctgtacgcctggacggataaagcgt > 1:828059‑M1/1‑10 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt > 2:571564‑M1/1‑9 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt > 2:5177074‑M1/1‑9 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt < 1:478829‑M1/50‑42 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgttt < 1:1961630‑M1/50‑43 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:5383574‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 2:1134711‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:4319466‑M1/1‑8 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 1:2497452‑M1/50‑44 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 2:48003‑M1/50‑44 (MQ=255) ataCCAttccatataacggccctgtacgcctggacggataaagcgtttac > 1:4984322‑M1/1‑6 (MQ=255) ataCCAttccatataacggccctgtacgcctggacggataaagcgtttac > 1:167545‑M1/1‑6 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg > 1:4399857‑M1/1‑5 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 2:4282844‑M1/49‑45 (MQ=255) aCCAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:2541445‑M1/1‑4 (MQ=255) aCCAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:4714382‑M1/1‑4 (MQ=255) cAttccatataacggccctgtacgcctggacggataaagcgtttacgcga < 2:4146530‑M1/50‑49 (MQ=255) attccatataacggccctgtacgcctggacggataaagcgtttacgcgac < 1:5234332‑M1/50‑50 (MQ=255) attccatataacggccctgtacgcctggacggataaagcgtttacgcga > 1:3876978‑M1/1‑1 (MQ=255) | ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCG > NC_000913/167434‑167532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |