| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 15 (0.140) | 164 (1.500) | 84/98 | 0.0 | 91.4% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 16 (0.150) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 183 total aligned reads displayed.
GCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173401‑173497 | atcattctcgtttacgttatcattcactttacatcagagatataccatt < 1:5243645‑M2/2‑1 (MQ=255)atcattctcgtttacgttatcattcactttacatcagagatataccaTTc < 2:3832849‑M2/3‑1 (MQ=255)atcattctcgtttacgttatcattcactttacatcagagatataccaTTc < 1:1965576‑M2/3‑1 (MQ=255) cattctcgtttacgttatcattcactttacatcagagatataccaTTCCa > 1:5121801‑M2/46‑50 (MQ=255) attctcgtttacgttatcattcactttacatcagagatataccaTTCCat < 2:3047098‑M2/6‑1 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 1:4630161‑M2/44‑50 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata < 1:4787547‑M2/7‑1 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 2:1103227‑M2/44‑50 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata < 2:1166827‑M2/7‑1 (MQ=255) ttctcgtttacgttatcattcactttacatcagagatataccaTTCCata < 1:264241‑M2/7‑1 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 2:5014110‑M2/43‑49 (MQ=255) tctcgtttacgttatcattcactttacatcagagatataccaTTCCata > 2:1262104‑M2/43‑49 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATaa < 1:1942560‑M2/10‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAAc < 1:4281350‑M2/11‑1 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 1:3237954‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg > 2:4188990‑M2/39‑50 (MQ=255) gtttacgttatcattcactttacatcagagatataccaTTCCATATAACg < 2:3557327‑M2/12‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg < 1:548447‑M2/13‑1 (MQ=255) tttacgttatcattcactttacatcagagatataccaTTCCATATAACgg > 2:153010‑M2/38‑50 (MQ=255) tttATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGc > 1:3206207/1‑50 (MQ=255) ttacgttatcattcactttacatcagagatataccaTTCCATATAACGGc > 1:2832279‑M2/37‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGcc > 1:914857‑M2/36‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGcc > 1:2658063‑M2/36‑50 (MQ=255) tacgttatcattcactttacatcagagatataccaTTCCATATAACGGc < 1:4806828‑M2/14‑1 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGccc > 2:488248‑M2/35‑50 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGccc > 1:2417885‑M2/35‑50 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGccc > 1:2235912‑M2/35‑50 (MQ=255) acgttatcattcactttacatcagagatataccaTTCCATATAACGGcc < 2:103831‑M2/15‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGccc < 2:2756767‑M2/16‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt > 1:1613329‑M2/34‑50 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt < 2:4222075‑M2/17‑1 (MQ=255) cgttatcattcactttacatcagagatataccaTTCCATATAACGGCCCt < 1:5069573‑M2/17‑1 (MQ=255) aTCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGccc < 2:2564196/49‑1 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:2022266‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTg > 1:2577990‑M2/32‑49 (MQ=255) ttatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGt < 1:3881557‑M2/19‑1 (MQ=255) tatcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTa > 1:315645‑M2/31‑50 (MQ=255) tATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTa > 1:1130450/1‑50 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc > 1:2373558‑M2/30‑50 (MQ=255) atcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc > 1:4926322‑M2/30‑50 (MQ=255) aTTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTAc > 2:3380349/1‑50 (MQ=255) tttGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACg < 2:382965/50‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 1:4693142‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTAc < 2:3851716‑M2/21‑1 (MQ=255) tcattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACg > 2:893223‑M2/29‑50 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 1:305423‑M2/28‑50 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 1:5319920‑M2/28‑50 (MQ=255) cattcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc > 2:4662717‑M2/28‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 2:474599‑M2/27‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 2:4780564‑M2/27‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGcc > 2:2662767‑M2/27‑50 (MQ=255) attcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGc < 2:3284974‑M2/23‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt > 2:3796389‑M2/26‑50 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 2:3686415‑M2/25‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:2160252‑M2/25‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt < 1:3754437‑M2/25‑1 (MQ=255) ttcactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCt > 1:1234329‑M2/26‑50 (MQ=255) gttgAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGcc < 1:4601295/49‑1 (MQ=255) cactttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTg > 1:4333616‑M2/24‑49 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTgg < 2:817547‑M2/27‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTgg < 1:1283819‑M2/27‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa < 1:2244335‑M2/28‑1 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa > 1:924908‑M2/23‑50 (MQ=255) actttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGa < 1:2944037‑M2/28‑1 (MQ=255) tttacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg > 1:3417160‑M2/21‑50 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACgg < 1:3545516‑M2/31‑1 (MQ=255) tacatcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACg < 1:1589941‑M2/30‑1 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 2:1575757‑M2/17‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 1:1077011‑M2/17‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 1:275756‑M2/17‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 2:4373862‑M2/17‑49 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt < 2:2995411‑M2/33‑1 (MQ=255) catcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGAt > 1:1421130‑M2/17‑49 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 2:1294993‑M2/35‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaa < 2:3278034‑M2/35‑1 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 2:2114293‑M2/16‑49 (MQ=255) atcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:3873845‑M2/16‑49 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 2:4541543‑M2/36‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:4494399‑M2/36‑1 (MQ=255) tcagagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATa > 1:408389‑M2/15‑48 (MQ=255) gagCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg > 2:2251801/1‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg < 2:5117044‑M2/37‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAg < 2:3353862‑M2/37‑1 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 2:4542382‑M2/13‑50 (MQ=255) agagatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc < 2:263399‑M2/38‑1 (MQ=255) agCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGc > 2:1869129/1‑50 (MQ=255) gagatataccaTTCCATATAACGGCCCTGCACGCCTGGACGGATAAAGCg > 1:3394083‑M2/12‑50 (MQ=255) agatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGt > 1:828059‑M2/11‑50 (MQ=255) gatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 2:5177074‑M2/10‑50 (MQ=255) gatataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 2:571564‑M2/10‑50 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:5383574‑M2/9‑49 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 1:4319466‑M2/9‑49 (MQ=255) atataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGtt > 2:1134711‑M2/9‑49 (MQ=255) tataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 1:2497452‑M2/43‑1 (MQ=255) ataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc > 1:749351‑M2/7‑50 (MQ=255) ataccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAc > 1:4984322‑M2/7‑50 (MQ=255) taccaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcg > 1:4399857‑M2/6‑50 (MQ=255) accaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:4847280‑M2/5‑50 (MQ=255) accaTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAcgc > 1:4714382‑M2/5‑50 (MQ=255) ttCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAc > 1:4190269/1‑49 (MQ=255) | GCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACA > NC_000913/173401‑173497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |