| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 565054 | 11 (0.100) | 108 (1.100) | 67/88 | 0.0 | 91.6% | coding (925/1164 nt) | intD | DLP12 prophage; putative integrase |
| ? | NC_000913 | 586109 = | 10 (0.100) | intergenic (‑476/+38) | ompT/envY | outer membrane protease VII (outer membrane protein 3b)/DNA‑binding transcriptional activator EnvY | |||||
Only 100 of 133 total aligned reads displayed.
CTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/565001‑565054‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACATCA > NC_000913/586109‑586157 CTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAAT > 2:3574768/1‑50CTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAAT > 1:2970582/1‑50 TGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATC > 1:75324/1‑50 GAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCT > 1:5011343/1‑50 AATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTT < 1:3103041/50‑1 AATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTT > 1:2496538/1‑50 AATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATC < 1:5036011/48‑1 AATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATC < 2:1425720/48‑1 AATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATC < 2:2759564/48‑1 ATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTC < 1:5210661/50‑1 ATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTC > 1:822533/1‑50 TCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCC < 1:2656536/50‑1 TCAGCCAGCTTGCCCAGGTGTGACTGAGGTCATGGAAACGGAAATCTTCC < 1:4985716/50‑1 AGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTC < 2:5060826/50‑1 AGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCT < 1:749946/49‑1 GCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCA < 2:3078304/50‑1 CCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCAT < 1:2823177/50‑1 CCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCAT > 2:589748/1‑50 CCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCAT < 1:4054366/50‑1 CCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCAT < 2:11266/50‑1 CAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATT > 2:4332583/1‑50 AGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTT < 1:4777928/50‑1 AGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATT > 1:3513235/1‑49 AGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATT > 1:3777736/1‑49 AGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATT > 2:675572/1‑49 AGCTTGCCCAGGTGTGTCTGAGGTAATGGAAACGGAAATCTTCCTCATT > 2:3230438/1‑49 GCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTA > 1:3168116/1‑50 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTAT < 1:5357204/50‑1 CTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTAT > 2:2500220/1‑50 GCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATG < 2:3665971/48‑1 GCCCAGGTGTGTCTGAGGCCATGGAAACGGAAATCTTCCTCATTTATGCC > 1:4274273/1‑50 CCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCC < 1:2422395/50‑1 CCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCG > 2:4121540/1‑50 CCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCG < 1:98394/50‑1 CAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGT < 1:431698/50‑1 CAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGT < 2:2467359/50‑1 CAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGT > 2:1069639/1‑50 CAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGT < 1:3077623/50‑1 CAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGT < 2:5326395/50‑1 AGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTC < 1:4548343/50‑1 AGGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTC < 1:1692882/50‑1 GGTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCT < 2:89927/50‑1 GTGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCT > 1:332966/1‑49 TGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTA < 1:2454337/50‑1 TGTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTA > 1:4724237/1‑50 GTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTAT > 1:3719258/1‑50 GTGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTAT > 1:2002652/1‑50 TGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTAT < 2:5199475/49‑1 TGTCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTAT < 1:4124512/49‑1 TCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCG < 2:2297779/50‑1 TCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCG < 2:4262223/50‑1 TCTGAGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCC < 2:4684554/49‑1 AGGTCATGGAAGCGGAAAGCTTCCTCATTTATGCCCGCCGTATCCGTT < 1:5164097/48‑1 AGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTC > 2:4638061/1‑50 AGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTT < 2:4016026/49‑1 AGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTT < 1:5260779/49‑1 AGGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGT < 2:4019650/47‑1 GGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCC < 2:3179066/50‑1 GGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCC < 2:335212/50‑1 GGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCC < 2:3880415/50‑1 GGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCC > 1:2811032/1‑50 GGTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCC > 1:1346499/1‑50 GTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCG < 2:1595265/50‑1 GTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCG > 1:3651030/1‑50 GTCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCG < 2:917963/50‑1 TCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGC < 1:1008919/50‑1 TCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGC < 1:746295/50‑1 TCATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGC > 1:1916815/1‑50 CATGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCT > 2:1882272/1‑50 TGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTT > 2:4988042/1‑50 TGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTT < 2:5183766/50‑1 TGGAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTT < 1:863990/50‑1 TGGAAACGGAAATCTTCCTCATTTATGCCCGGCTTATCCGTTTCCGCTTT < 2:167002/50‑1 GAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGC > 1:4817826/1‑50 GAAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGC < 1:3233411/50‑1 AAACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCC > 2:3293158/1‑50 AACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCC < 1:3834530/50‑1 AACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCC > 2:1077131/1‑50 AACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCC < 2:1927236/50‑1 AACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCC > 1:2331880/1‑50 ACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCT > 2:1496122/1‑50 ACGGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCT < 2:4722878/50‑1 GGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTC < 2:1998409/50‑1 GGAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTC < 2:2161380/50‑1 GAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCA < 2:4075234/50‑1 GAAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCA > 2:885373/1‑50 GAAATCGTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCA < 1:4655507/50‑1 AAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCAC > 1:2651140/1‑50 AAATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCAC < 1:3786035/50‑1 AATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCGCC < 2:370260/50‑1 AATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCAC > 2:3537283/1‑49 ATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCA > 1:3272798/1‑50 ATCTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCA < 1:1106922/50‑1 aTTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACA > 2:568924/2‑50 TTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACAT > 1:5289331/1‑50 TTCCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACAT > 1:650498/1‑50 CCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACATCA > 2:3618598/1‑50 CCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACATCA > 2:3108617/1‑50 CCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACA < 1:1402761/47‑1 CCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCAC < 2:5036186/46‑1 CTGAATCAGCCAGCTTGCCCAGGTGTGTCTGAGGTCATGGAAACGGAAATCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/565001‑565054‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcCTCATTTATGCCCGTCTTATCCGTTTCCGCTTTGCCCTTCACCACATCA > NC_000913/586109‑586157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |