| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 819775 | NA (NA) | 127 (1.160) | 67/98 | 0.0 | 89.4% | noncoding (17/27 nt) | REPt74 | REPt74 |
| ? | NC_000913 | 882753 = | 15 (0.140) | intergenic (‑19/+39) | deoR/ybjG | DNA‑binding transcriptional repressor DeoR/undecaprenyl pyrophosphate phosphatase | |||||
Only 100 of 127 total aligned reads displayed.
AGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/819728‑819775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG > NC_000913/882753‑882800 AGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTT < 1:677569/50‑1AGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTT > 1:3172132/1‑50 GGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTG < 2:1059737/50‑1 GCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGA < 1:2202151/50‑1 CGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTG > 1:932505/1‑48 CGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTG > 1:1549574/1‑48 GGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAG < 1:2072877/50‑1 GGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAG > 1:4271963/1‑50 GGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAG < 2:4279151/50‑1 GCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGC < 1:1128790/50‑1 GCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGC < 1:4555500/50‑1 GCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGC < 2:1491116/50‑1 CAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGC > 2:388591/1‑49 CAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGC > 1:3869284/1‑49 AAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGA < 2:1661510/50‑1 AAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGC > 2:2471783/1‑48 AAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAG > 1:1777013/1‑50 AAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAG < 2:3345481/50‑1 AAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAG > 1:2229955/1‑50 AACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGC > 2:1466139/1‑50 ACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCC < 2:378039/50‑1 ACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCC < 1:4510995/50‑1 ACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCC > 1:1575544/1‑50 ACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCC < 2:3494713/50‑1 ACGCTGGTAGTTTTTTGCTAGCCGGATAAGGCACCGCTTTGAAGCGAGCC < 1:5382000/50‑1 CGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCG > 2:1952600/1‑50 CGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCG < 1:4510245/50‑1 CGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCG > 1:776579/1‑50 CGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCG < 1:1084387/50‑1 GCTGGTAGTTTTTTGTTAGCCGGCTAAGGCACCGCTTTGAAGCGAGCCGC > 1:5067768/1‑50 GCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGC > 2:1505427/1‑50 GCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGC < 2:4445242/50‑1 GCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGC < 2:660083/50‑1 CTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCT < 1:5189911/50‑1 GTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAA > 1:766887/1‑50 GTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAA > 1:3955558/1‑50 GTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCA < 1:1647123/49‑1 GTAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCA < 2:3635000/49‑1 TAGTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAAT < 1:1302989/50‑1 GTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATA < 1:4721665/49‑1 GTTTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATA < 2:3261866/49‑1 TTTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTA > 1:2623212/1‑50 TTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTA < 1:4397337/49‑1 TTTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTA < 1:2725322/49‑1 gTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTAC < 2:2717498/48‑1 TTTGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACA > 2:1301260/1‑50 TGTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACAC < 2:3585691/49‑1 GTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTT > 2:5314163/1‑50 GTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACT < 2:4605781/49‑1 GTTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACT < 1:2452718/49‑1 TTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTT > 2:2975570/1‑50 TTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTT < 1:1979530/50‑1 TTAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTT < 1:295187/49‑1 TAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTT > 2:4608596/1‑50 TAGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTT > 2:2229251/1‑50 AGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTT > 1:2077279/1‑49 AGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTT > 1:1685574/1‑49 AGCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTT > 2:4281400/1‑49 GCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTA < 1:2072845/50‑1 GCCGGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTT < 2:890323/49‑1 GGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCA < 1:1049280/50‑1 GGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCA < 1:3416939/50‑1 GGATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAG > 1:1252357/1‑48 GATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAG < 2:2177047/50‑1 ATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGA < 2:2860255/50‑1 ATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCA > 1:3282511/1‑48 ATAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCA > 1:5347363/1‑48 TAAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAG < 1:583713/50‑1 AAGGCACCGCTTTGCAGCGAGCCGCTCAATACTACACTTTTTAGCA > 2:5237314/1‑46 AAGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCA > 1:4379515/1‑46 AGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGAT < 2:1709352/50‑1 AGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGAT < 1:862770/50‑1 AGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGA < 1:4904672/49‑1 AGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCA > 1:455909/1‑45 AGGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCA > 1:3686259/1‑45 GGCACCGCTTTGAAGCGAGCCGCTCAATGCTTCACTTTTTAGCAGAGATC < 2:5107295/50‑1 GGCACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATC < 2:1678238/50‑1 CACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAG < 2:4208602/50‑1 CACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAG > 1:4612201/1‑50 CACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAG > 1:4074232/1‑50 ACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGT < 2:3184591/50‑1 ACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGT > 1:5283504/1‑50 ACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGT > 2:2671954/1‑50 ACCGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGT < 2:1355927/50‑1 CGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCA < 1:3685985/50‑1 CGCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCA < 1:910267/50‑1 CGCTTTGAAGCGAGCCGCTCAATACTACACTATTTAGCAGAGATCAGTCA < 2:3724913/50‑1 GCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCAC < 1:11553/50‑1 GCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCAC < 2:4979383/50‑1 GCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCAC > 2:918111/1‑50 GCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCAC < 2:4567356/50‑1 GCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCAC < 2:319899/50‑1 GCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCAC < 2:1492936/50‑1 GCTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCAC < 1:3076404/50‑1 CTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG > 2:2863993/1‑50 CTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG < 1:2406474/50‑1 CTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG > 2:1362361/1‑50 CTTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG < 1:5389927/50‑1 TTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG > 2:1789472/1‑49 TTTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG > 1:4693636/1‑49 AGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/819728‑819775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGAAGCGAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACG > NC_000913/882753‑882800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |