| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 819775 | NA (NA) | 127 (1.160) | 67/98 | 0.0 | 89.4% | noncoding (17/27 nt) | REPt74 | REPt74 |
| ? | NC_000913 | 882753 = | 15 (0.140) | intergenic (‑19/+39) | deoR/ybjG | DNA‑binding transcriptional repressor DeoR/undecaprenyl pyrophosphate phosphatase | |||||
Only 100 of 137 total aligned reads displayed.
GCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTGCGTCCGGCAATTTCACCGCTCAGTACATACGTTTACGCTGCGTCGAT > NC_000913/819726‑819823 | gcagGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCt < 1:1181277/50‑1 (MQ=255)gcagGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCt < 2:3651147/50‑1 (MQ=255) aGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt > 1:1171072‑M1/1‑48 (MQ=255) aGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt < 1:677569‑M1/50‑3 (MQ=255) aGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt > 1:3172132‑M1/1‑48 (MQ=255) aGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTtt < 1:4565322‑M1/50‑3 (MQ=255) ggcggcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttg < 2:1059737‑M1/50‑4 (MQ=255) gcggcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttga < 2:566051‑M1/50‑5 (MQ=255) gcggcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttga < 1:2202151‑M1/50‑5 (MQ=255) cggcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttg > 1:1549574‑M1/1‑45 (MQ=255) cggcAAAACGCTGGTAGTTTTTTGTTAGCCGGACAAGGCACCGCTGCGTc > 2:4957841/1‑50 (MQ=255) ggcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaag < 2:4279151‑M1/50‑7 (MQ=255) ggcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaag > 1:4271963‑M1/1‑44 (MQ=255) gcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagc < 2:1491116‑M1/50‑8 (MQ=255) gcAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTGCGTCCg > 1:4190795/1‑50 (MQ=255) cAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagc > 1:3869284‑M1/1‑42 (MQ=255) cAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagc > 2:388591‑M1/1‑42 (MQ=255) aaaaCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcga < 2:1661510‑M1/50‑10 (MQ=255) aaaaCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagc > 2:1945712‑M1/1‑41 (MQ=255) aaaaCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagc > 2:2471783‑M1/1‑41 (MQ=255) aaCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagc > 2:1466139‑M1/1‑39 (MQ=255) aaCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagc > 1:2030621‑M1/1‑39 (MQ=255) aaCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagc > 1:4054397‑M1/1‑39 (MQ=255) aCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagcc < 1:4510995‑M1/50‑13 (MQ=255) aCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagcc < 2:3494713‑M1/50‑13 (MQ=255) aCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagcc < 2:378039‑M1/50‑13 (MQ=255) aCGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagcc > 1:1575544‑M1/1‑38 (MQ=255) aCGCTGGTAGTTTTTTGCTAGCCGGATAAGGCACCGCTttgaagcgagcc < 1:5382000‑M1/50‑13 (MQ=255) cGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccg < 1:1084387‑M1/50‑14 (MQ=255) cGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccg > 2:1952600‑M1/1‑37 (MQ=255) cGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccg < 1:4510245‑M1/50‑14 (MQ=255) gCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgc > 1:3442301‑M1/1‑36 (MQ=255) gCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgc > 2:1505427‑M1/1‑36 (MQ=255) gCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTGCGTCCGGCAAttt > 2:3466847/1‑50 (MQ=255) cTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgct < 1:5189911‑M1/50‑16 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaa > 1:3955558‑M1/1‑32 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaa > 1:766887‑M1/1‑32 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctca < 1:1647123‑M1/49‑18 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctca < 2:3635000‑M1/49‑18 (MQ=255) gTAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctc < 1:3160955‑M1/48‑17 (MQ=255) tAGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaat < 1:1302989‑M1/50‑20 (MQ=255) aGTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaata > 1:643454‑M1/1‑30 (MQ=255) gTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaata < 1:4721665‑M1/49‑21 (MQ=255) gTTTTTTGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaata < 2:3261866‑M1/49‑21 (MQ=255) tttttGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatacta > 1:2623212‑M1/1‑27 (MQ=255) ttttGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatacta < 1:2725322‑M1/49‑24 (MQ=255) ttttGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatacta < 1:4397337‑M1/49‑24 (MQ=255) gttgTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactac < 2:2717498‑M1/48‑25 (MQ=255) ttGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactaca < 1:4900245‑M1/49‑26 (MQ=255) tGTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacac < 2:3585691‑M1/49‑27 (MQ=255) gTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacactt > 2:5314163‑M1/1‑22 (MQ=255) gTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacact < 2:4605781‑M1/49‑28 (MQ=255) gTTAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacact < 1:2452718‑M1/49‑28 (MQ=255) ttAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacacttt > 2:2975570‑M1/1‑21 (MQ=255) ttAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacacttt < 1:1979530‑M1/50‑30 (MQ=255) ttAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacactt < 1:295187‑M1/49‑29 (MQ=255) tAGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacactttt > 2:2229251‑M1/1‑20 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacactttt > 2:4281400‑M1/1‑19 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacactttt > 1:1685574‑M1/1‑19 (MQ=255) aGCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacactttt > 1:2077279‑M1/1‑19 (MQ=255) gCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacacttttta < 1:2072845‑M1/50‑33 (MQ=255) gCCGGATAAGGCACCGCTttgaagcgagccgctcaatactacacttttt < 2:890323‑M1/49‑32 (MQ=255) ggATAAGGCACCGCTttgaagcgagccgctcaatactacactttttagca < 1:1049280‑M1/50‑36 (MQ=255) ggATAAGGCACCGCTttgaagcgagccgctcaatactacactttttagca < 1:3416939‑M1/50‑36 (MQ=255) ggATAAGGCACCGCTttgaagcgagccgctcaatactacactttttag > 2:3202990‑M1/1‑15 (MQ=255) ggATAAGGCACCGCTttgaagcgagccgctcaatactacactttttag > 1:2184288‑M1/1‑15 (MQ=255) aTAAGGCACCGCTttgaagcgagccgctcaatactacactttttagca > 1:5347363‑M1/1‑13 (MQ=255) aaGGCACCGCTttgcagcgagccgctcaatactacactttttagca > 2:5237314‑M1/1‑11 (MQ=255) aaGGCACCGCTttgaagcgagccgctcaatactacactttttagca > 1:4379515‑M1/1‑11 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactacactttttagcagagat < 2:4956830‑M1/50‑41 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactacactttttagcagagat < 1:862770‑M1/50‑41 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactacactttttagcagaga < 2:2510426‑M1/49‑40 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactacactttttagcagaga < 1:4904672‑M1/49‑40 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactacactttttagca > 1:455909‑M1/1‑10 (MQ=255) aGGCACCGCTttgaagcgagccgctcaatactacactttttagca > 2:2960207‑M1/1‑10 (MQ=255) ggCACCGCTttgaagcgagccgctcaatactacactttttagcagagatc < 2:1678238‑M1/50‑42 (MQ=255) ggCACCGCTttgaagcgagccgctcaatactacactttttagcagagat > 2:4402825‑M1/1‑9 (MQ=255) cACCGCTttgaagcgagccgctcaatactacactttttagcagagatcag > 1:4612201‑M1/1‑7 (MQ=255) cACCGCTttgaagcgagccgctcaatactacactttttagcagagatcag > 1:4074232‑M1/1‑7 (MQ=255) cACCGCTttgaagcgagccgctcaatactacactttttagcagagatcag > 2:3953459‑M1/1‑7 (MQ=255) cACCGCTGCGTCCGGCAATTTCTCCGCTCAGTACATGCGTTTACGCTGCg < 2:2789973/50‑1 (MQ=255) aCCGCTttgaagcgagccgctcaatactacactttttagcagagatcagt > 1:5283504‑M1/1‑6 (MQ=255) aCCGCTttgaagcgagccgctcaatactacactttttagcagagatcagt < 2:1355927‑M1/50‑45 (MQ=255) aCCGCTttgaagcgagccgctcaatactacactttttagcagagatcagt > 2:1080982‑M1/1‑6 (MQ=255) cGCTttgaagcgagccgctcaatactacactttttagcagagatcagtca < 1:3685985‑M1/50‑47 (MQ=255) cGCTttgaagcgagccgctcaatactacactttttagcagagatcagtca < 1:776878‑M1/50‑47 (MQ=255) cGCTttgaagcgagccgctcaatactacactttttagcagagatcagtca < 1:910267‑M1/50‑47 (MQ=255) gCTttgaagcgagccgctcaatactacactttttagcagagatcagtcac < 2:4979383‑M1/50‑48 (MQ=255) gCTttgaagcgagccgctcaatactacactttttagcagagatcagtcac > 2:918111‑M1/1‑3 (MQ=255) gCTttgaagcgagccgctcaatactacactttttagcagagatcagtcac < 2:4567356‑M1/50‑48 (MQ=255) gCTttgaagcgagccgctcaatactacactttttagcagagatcagtcac < 1:11553‑M1/50‑48 (MQ=255) gCTttgaagcgagccgctcaatactacactttttagcagagatcagtcac < 2:319899‑M1/50‑48 (MQ=255) gCTttgaagcgagccgctcaatactacactttttagcagagatcagtcac < 2:1492936‑M1/50‑48 (MQ=255) gCTttgaagcgagccgctcaatactacactttttagcagagatcagtcac < 1:3076404‑M1/50‑48 (MQ=255) gCTGCGTCCGGCAATTTCACCGCTCAGTACATACGTTTACGCTGCGTCGa > 1:1117956/1‑50 (MQ=255) cTttgaagcgagccgctcaatactacactttttagcagagatcagtcacg > 2:2863993‑M1/1‑2 (MQ=255) cTttgaagcgagccgctcaatactacactttttagcagagatcagtcacg < 1:2406474‑M1/50‑49 (MQ=255) cTttgaagcgagccgctcaatactacactttttagcagagatcagtcacg > 2:1362361‑M1/1‑2 (MQ=255) cTttgaagcgagccgctcaatactacactttttagcagagatcagtcacg < 1:5389927‑M1/50‑49 (MQ=255) tttgaagcgagccgctcaatactacactttttagcagagatcagtcacg > 2:1789472‑M1/1‑1 (MQ=255) | GCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGATAAGGCACCGCTGCGTCCGGCAATTTCACCGCTCAGTACATACGTTTACGCTGCGTCGAT > NC_000913/819726‑819823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |