| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 14 (0.130) | 157 (1.430) | 75/98 | 0.0 | 91.5% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 15 (0.140) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
Only 100 of 157 total aligned reads displayed.
ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466498‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > NC_000913/2476179‑2476226 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAG < 1:5106882/50‑1ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAG < 2:4490329/50‑1ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA < 1:2460649/49‑1ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA < 1:204108/49‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 2:5001900/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 1:1282354/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 2:4948607/50‑1 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG > 1:810250/1‑50 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:3493559/1‑50 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:562507/50‑1 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:1626611/1‑49 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA < 2:3486018/50‑1 AAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:4871423/1‑49 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 2:1605625/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4286221/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4190459/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA < 2:3969231/50‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA < 1:1879060/50‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 2:3039817/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:1181743/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA < 1:3124022/50‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCAT < 2:3255421/49‑1 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:3947651/1‑49 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACA < 2:632697/50‑1 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 2:2642663/1‑48 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:2210201/1‑48 cGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGCGCCATACAG > 1:312058/2‑50 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG < 2:4428969/50‑1 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:2357521/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 2:4070518/1‑50 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 2:3770791/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:4464578/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 2:4550064/49‑1 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:3365394/1‑50 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 2:3519522/1‑49 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 2:2157912/1‑49 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 2:4649950/1‑49 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 2:3172586/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:1032017/50‑1 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:2348138/50‑1 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:4725441/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:2537782/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 2:5203922/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:5314908/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:2740941/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 2:494340/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT < 2:3660549/50‑1 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT < 1:1582250/50‑1 TTTACCCACCGGATTTTTCCCCTAGAGCCATACAGCCTCACACTCGAT > 2:4752028/1‑48 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:880786/1‑48 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3134410/1‑48 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 2:286750/49‑1 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 2:1886842/49‑1 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:2070384/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:4290491/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:3876615/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 2:3816709/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG < 2:3354010/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 2:2917037/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG < 1:662603/49‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 2:3703699/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC < 2:368753/50‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:4865639/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC < 2:1040435/49‑1 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:2452950/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 2:4862172/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 2:5203652/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 2:4610894/50‑1 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 2:4362695/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:5173080/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:1379383/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:794423/1‑50 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 1:4733898/50‑1 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCA < 2:1113292/50‑1 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 2:2680867/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG < 1:1237739/50‑1 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT < 2:2129956/50‑1 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT > 2:4124004/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:4770949/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 2:5009566/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 2:4373226/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:2162560/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:5289221/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 2:1186809/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 2:4427146/50‑1 TTTTCCCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 2:4857213/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC < 2:2466983/49‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:3337853/1‑49 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 2:2533752/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT > 1:672517/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT < 1:1004379/49‑1 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT < 2:37231/49‑1 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA < 1:2283991/49‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 2:2538534/50‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA > 2:4567609/1‑49 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA > 2:3191174/1‑49 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA > 2:322976/1‑49 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:97490/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:4489960/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:3496806/1‑50 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466498‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > NC_000913/2476179‑2476226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |