| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 9 (0.080) | 117 (1.070) | 62/98 | 0.0 | 92.5% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 10 (0.090) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
Only 100 of 117 total aligned reads displayed.
TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:1068320/49‑1TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:3413896/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACA < 1:2837128/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACA < 2:3963393/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG > 1:1435505/1‑50 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG > 1:2837117/1‑50 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 2:2899084/49‑1 GCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 2:4191266/1‑50 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGC < 1:4728134/50‑1 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 2:2386096/1‑49 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 2:761855/1‑50 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 1:982923/1‑50 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 2:2052895/1‑50 GGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC > 2:3891631/1‑50 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT < 1:2242323/50‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT < 2:4004459/50‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT < 2:5221230/50‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC > 2:3656596/1‑49 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC < 2:5181797/49‑1 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA > 2:446110/1‑50 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA < 2:4925743/50‑1 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA < 2:5129241/50‑1 AAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAAC > 2:30592/1‑50 AAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAAC < 1:1461134/50‑1 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC > 1:4483579/1‑50 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC > 2:4390201/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 1:4159473/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 2:1432898/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC > 2:1831832/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC > 2:1847279/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 2:2751589/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 2:3315968/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 2:77794/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:3051800/1‑50 TAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:3365545/1‑49 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:1998694/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGA < 1:479998/49‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGT < 1:3366584/50‑1 ATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 2:5229924/1‑48 gaTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAG > 2:3325868/3‑50 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 1:1128845/49‑1 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 1:2486450/49‑1 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 1:3106149/49‑1 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 2:1811345/1‑47 TGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGAC > 2:1887248/1‑50 GACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT > 1:1715007/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG < 2:1296948/50‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 1:5128081/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 1:1279353/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 2:1604139/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGAC < 1:2194244/48‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAG < 1:1199933/46‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCAGGACGTAGACT < 1:3189102/49‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGT < 1:4920255/50‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 2:4638025/50‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 2:1275096/50‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT > 2:38195/1‑50 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATT < 2:4771544/50‑1 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATT < 1:3378420/50‑1 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATT < 1:949277/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 2:2167151/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 2:2771998/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 2:4970914/1‑50 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 2:1123927/1‑50 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 2:4913909/1‑49 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 1:4974117/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA < 1:3639316/50‑1 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:1050903/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:412547/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA < 1:3815496/50‑1 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 2:3365624/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 2:5322032/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 2:2818783/1‑49 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 2:3355080/1‑49 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 2:4457455/1‑49 AGGAATAGAACACAGGCGGCACTAACCGGGACGTAGACTGTATTACGAA < 2:708037/49‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 2:1714046/49‑1 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG > 2:1609490/1‑50 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 2:4245132/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC > 1:1657641/1‑50 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:1557471/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC > 1:949869/1‑50 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:5337458/50‑1 AATAGAACACAGGCGGCACTAACCCGGACGTCGACTGTATTACAAAAGCG > 2:5011265/1‑50 AATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCG > 2:4859155/1‑50 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:4428996/1‑50 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAAAAAAGCGG > 2:3228649/1‑50 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGC < 1:1222327/50‑1 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA < 2:719384/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA < 1:2833823/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA < 2:4018504/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA < 1:1933387/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA < 1:4108713/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA > 1:1361223/1‑49 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 1:1979707/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 2:3136255/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 2:3567250/50‑1 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > 1:3453312/1‑50 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > 2:5232203/1‑50 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > 2:691275/1‑50 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |