| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3362161 | 8 (0.070) | 135 (1.230) | 69/98 | 0.0 | 91.5% | coding (50/675 nt) | yhcA | putative fimbrial chaperone YhcA |
| ? | NC_000913 | 3367643 = | 17 (0.160) | intergenic (+1/‑184) | yhcF/yhcG | DUF1120 domain‑containing protein YhcF/DUF1016 domain‑containing protein YhcG | |||||
Only 100 of 135 total aligned reads displayed.
GCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3362114‑3362161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG > NC_000913/3367643‑3367691 GCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACT > 2:2473312/1‑49 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 2:1714051/50‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 2:971100/50‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA > 2:3523526/1‑50 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAA < 2:1970622/50‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTA < 2:2832288/49‑1 CTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTA < 1:5130550/49‑1 CAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAAC > 2:3259357/1‑49 AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAA < 1:2067485/50‑1 AGACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAAC < 1:914413/48‑1 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG > 2:4351074/1‑50 ACACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATG > 2:4863067/1‑50 CACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGC < 2:2433801/50‑1 CACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGC < 1:3035951/50‑1 ACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCC > 1:1148511/1‑50 ACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCC > 2:1474299/1‑50 ACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCC < 2:3347094/50‑1 ACATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCC > 1:850799/1‑50 CATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCG < 2:852614/50‑1 CATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCG > 1:230741/1‑50 CATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCG > 2:2028981/1‑50 CATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCG < 2:5193140/50‑1 ATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGG < 2:1080731/50‑1 ATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGG < 1:2649023/50‑1 ATTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGG < 1:5173017/50‑1 TTACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA > 1:1050955/1‑50 ACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGAC < 1:370644/49‑1 ACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGAC < 2:138465/49‑1 ACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA > 2:598235/1‑48 ACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA > 2:2313394/1‑48 ACATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGA > 1:591023/1‑48 CATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACA < 2:5341655/49‑1 ATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGG < 2:2748210/50‑1 ATTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAG > 2:2792400/1‑49 ATTCACTGTATTTAGAACAACATCAATGAATACTAACAATGCCGGACAGG < 2:1256856/50‑1 TTCACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAG > 2:1765653/1‑48 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTA < 2:5171482/50‑1 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTA < 2:4761402/50‑1 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGT < 2:4303215/49‑1 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGT < 1:1857380/49‑1 ACTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGT < 2:3348891/49‑1 CTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 2:2983158/1‑50 CTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 1:3202877/1‑50 CTGTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTAC > 2:4432925/1‑50 GTATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTA > 2:336031/1‑50 TATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTAT < 2:2951043/50‑1 TATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTAT < 1:302957/50‑1 TATTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACT < 1:4422440/48‑1 TTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCA < 1:5167764/50‑1 TTTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTAT > 1:149286/1‑48 TTATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAG > 1:3476370/1‑50 TATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGG > 2:3651438/1‑50 TATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAG < 1:529931/49‑1 ATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGG < 1:746626/49‑1 ATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGG < 1:3938050/49‑1 ATAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGG < 1:3620310/49‑1 TAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCA > 2:4494791/1‑50 TAACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCA > 1:3874096/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 2:407108/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATT > 2:2890033/1‑50 ACAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCAT < 1:3306560/49‑1 CAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTC > 2:1884929/1‑50 CAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTC < 1:4192180/50‑1 CAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTC > 1:4230463/1‑50 CAACATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTC > 1:678412/1‑50 CATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTT > 2:2632274/1‑50 CATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTT < 1:1394346/50‑1 CATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTT > 2:710110/1‑50 CATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTT < 2:3164143/50‑1 CATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTT < 1:989087/50‑1 ATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTT > 1:257980/1‑50 ATCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTT < 2:3227373/50‑1 aCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTT > 1:3045960/2‑49 TCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTT < 2:4783337/50‑1 TCAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTT > 2:2601127/1‑49 CAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA > 1:1848106/1‑50 CAATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA > 1:1417789/1‑50 AATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTAT < 1:912322/50‑1 AATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA > 1:1209102/1‑49 AATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA > 2:2458675/1‑49 AATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTA < 1:5188433/49‑1 AATGAATACTAACAATGCCGGACAGGAGCACTATCAGGCATTCGTTTTA > 2:437888/1‑49 ATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATA < 2:3664176/50‑1 ATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATA < 2:965453/50‑1 ATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATA < 2:4553792/50‑1 ATGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATA < 2:4755664/50‑1 TGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATAC < 2:1652055/50‑1 TGAATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATAC > 2:659891/1‑50 AATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGA < 1:2238191/50‑1 AATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACG < 2:4146394/49‑1 ATACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGAT < 2:2655056/50‑1 TACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATC < 2:1250649/50‑1 TACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATC > 2:2287934/1‑50 TACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATC < 1:2039667/50‑1 ACTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCG > 1:2689784/1‑50 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG < 2:1446557/50‑1 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG < 2:5351346/50‑1 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG > 1:5241079/1‑50 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCG < 1:3944294/49‑1 CTAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCG < 1:666699/49‑1 GCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3362114‑3362161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACAATGCCGGACAGGAGTACTATCAGGCATTCGTTTTATACGATCGG > NC_000913/3367643‑3367691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |