| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 11 (0.100) | 109 (1.040) | 64/94 | 0.0 | 91.8% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 9 (0.090) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 124 total aligned reads displayed.
ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 2:760454/1‑50 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:3616958/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1592254/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 2:519862/49‑1 CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:3206347/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 2:138490/49‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:2615876/49‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:1645037/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:4206250/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 2:2597317/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA > 1:3286439/1‑50 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:5065651/50‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:4679176/49‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 2:4723701/49‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 2:3894618/1‑49 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 2:3196585/49‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 2:1697702/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:947924/1‑49 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 2:4211825/1‑49 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 2:2526947/1‑49 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:3391953/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 2:2832834/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:535808/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:2154598/1‑50 TCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 2:2807453/1‑49 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 1:458762/1‑50 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 2:5145144/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 2:1535671/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:1342483/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:5139711/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:2001657/47‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCGCTT < 1:4207869/49‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:3150139/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:740486/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:5188698/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:2496595/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:4976777/1‑50 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:497707/1‑50 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 2:1912743/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 2:1445248/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:2933990/1‑49 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 2:3154373/1‑49 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 2:5356561/1‑49 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 2:3799902/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:2489706/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 2:4998619/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:3451988/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 2:5161194/49‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:793219/49‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 2:3520812/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:705335/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:1547059/1‑49 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 2:3692312/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 2:4467431/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:3588488/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 2:3767911/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:3926197/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:4069886/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:1604670/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:5370226/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:208940/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 2:4982918/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 2:1977015/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:3067564/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:718212/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 2:1835158/1‑49 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:2790936/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 2:3222944/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 2:3314487/1‑50 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 2:135782/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:3041818/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:223426/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:5258431/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:2275345/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 2:3957199/50‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 2:3426217/1‑49 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:1717113/50‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3012912/1‑50 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:2761178/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 2:4603917/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 2:5350143/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:1467908/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4129018/1‑47 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:4677850/50‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 2:482309/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT > 1:3647641/1‑50 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 2:285049/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 2:4695481/1‑50 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 2:4949568/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:1544166/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 2:2507468/1‑49 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 2:2278519/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA < 2:3670971/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:4808867/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 2:5136513/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:2096849/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 2:3984406/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:3057282/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 2:5257684/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:1374244/50‑1 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |