| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 9 (0.080) | 104 (0.950) | 54/98 | 0.2 | 90.4% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 13 (0.120) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 104 total aligned reads displayed.
TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722076‑3722123 TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:2848026/1‑50 ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 2:836571/1‑50 ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:1417451/1‑50 ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 2:1691270/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT < 1:1145115/50‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:4633219/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 2:3196555/48‑1 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 2:361879/1‑50 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:4583899/1‑50 TTTCTGC‑GCATTCCCAGCGGCCTGTGTTGATTTCCAACGAGTATAACTT < 2:2393615/49‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT < 2:5157178/50‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:2596080/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 1:122343/49‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 1:3195061/49‑1 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:2677181/1‑49 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:3992667/1‑49 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 2:3559026/49‑1 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 2:1682552/49‑1 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 2:1936780/49‑1 gcGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT > 1:738591/3‑49 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:3908406/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:3609786/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:3629019/48‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 2:4082555/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:1852891/1‑49 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:2871657/1‑49 CATTCCTAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 2:3723467/1‑48 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:1502524/50‑1 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:1550428/50‑1 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:429376/1‑48 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:4152316/1‑48 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:3227979/1‑48 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 2:1183853/1‑50 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:3854944/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:618614/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:3933109/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 2:767132/1‑50 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:2600571/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:3859680/1‑50 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG > 2:1760704/1‑50 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG < 1:536476/50‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 1:15069/49‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 2:2580005/49‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 2:2652813/1‑50 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 2:5137984/1‑50 atCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 2:3935035/48‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAGCTTTGATTTATAGTCAGGT < 2:4135767/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:2475158/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 2:3060260/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 2:3334995/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG > 2:2133427/1‑50 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 1:4541340/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG > 2:4302184/1‑50 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG > 2:4437449/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 2:172718/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 2:1588820/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:3103076/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:158117/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT > 2:2196522/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:5178426/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG < 1:670792/48‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG < 2:4283380/48‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG < 1:3453295/48‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 2:1884373/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 2:794194/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 2:2174164/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 1:3930192/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 1:3080161/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 2:2880794/49‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTAAGGTGGGGCTTTT < 1:3827419/50‑1 GTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC > 1:2499772/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT > 2:1413009/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 2:4648213/49‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 2:1026786/49‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 2:1738039/49‑1 GATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT > 2:1769832/1‑50 GATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC < 2:309125/49‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG < 2:3834007/50‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT < 2:1041250/49‑1 TTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGT > 1:3122733/1‑50 TTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGT < 2:182305/50‑1 TTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTC > 1:400054/1‑50 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT < 1:710462/49‑1 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 2:172878/1‑50 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:5154377/50‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT > 1:2564885/1‑50 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT < 2:4910753/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 2:4667366/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 2:2503233/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 2:3424138/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:2823179/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC > 2:2081621/1‑50 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:2832799/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:1350929/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > 2:4102567/1‑50 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:4889582/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:689513/50‑1 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG < 2:2290291/50‑1 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > 1:214775/1‑50 TAACTTTGATTTATAGTCAGGTCGGGCTTTTCTCTGTCTGCCTTTCGGT > 2:3447998/1‑49 TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722076‑3722123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |