| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 9 (0.080) | 104 (0.950) | 54/98 | 0.2 | 90.4% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 13 (0.120) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 122 total aligned reads displayed.
CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 | cTATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt > 1:5290717/1‑49 (MQ=255) tataTTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATg > 2:1391686/1‑50 (MQ=255) atatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 2:836571‑M1/1‑47 (MQ=255) atatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 2:1691270‑M1/1‑47 (MQ=255) tatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:3279237/47‑1 (MQ=255) tatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 2:5206807/47‑1 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:307354/46‑1 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 2:4753132/46‑1 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact < 1:1145115‑M1/50‑5 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact > 1:4633219‑M1/1‑46 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa < 2:3196555‑M1/48‑3 (MQ=255) atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTAc > 2:250427/1‑50 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 1:4583899‑M1/1‑45 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 2:361879‑M1/1‑45 (MQ=255) tttCTGC‑GCATTCCCAGCGGCCTGTGTTGATTTCCAACGAGTATaactt < 2:2393615‑M1/49‑6 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:2596080‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt < 2:5157178‑M1/50‑7 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt < 1:122343‑M1/49‑6 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt < 1:3195061‑M1/49‑6 (MQ=255) ttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:2677181‑M1/1‑43 (MQ=255) ttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:3992667‑M1/1‑43 (MQ=255) tCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttg < 2:1936780‑M1/49‑8 (MQ=255) tCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttg < 2:3559026‑M1/49‑8 (MQ=255) gcgcaTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatt > 1:738591‑M1/3‑39 (MQ=255) cGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCAcc > 1:1141364/1‑49 (MQ=255) cGGCATTCCCAGCCTACTGTGTTGATTTCCAACGAGTATGTACTGCAcc > 2:2642024/1‑49 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta < 1:3908406‑M1/49‑13 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt < 1:3609786‑M1/48‑12 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt < 1:3629019‑M1/48‑12 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatt < 1:341484‑M1/47‑11 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttat < 2:4082555‑M1/50‑14 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:2871657‑M1/1‑37 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata < 1:1550428‑M1/50‑15 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata < 1:1502524‑M1/50‑15 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:429376‑M1/1‑36 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:3227979‑M1/1‑36 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag < 1:3854944‑M1/50‑16 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag > 2:1183853‑M1/1‑35 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag < 1:618614‑M1/50‑16 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt < 2:3011929‑M1/50‑17 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt < 1:3933109‑M1/50‑17 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt < 1:2600571‑M1/50‑17 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 2:767132‑M1/1‑34 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:865251‑M1/1‑34 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcag > 2:1760704‑M1/1‑31 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcag < 1:536476‑M1/50‑20 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtca < 1:15069‑M1/49‑19 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtca < 2:2580005‑M1/49‑19 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg > 2:2652813‑M1/1‑30 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg > 2:5137984‑M1/1‑30 (MQ=255) atcctcctgtGTTGATTTCCAACGAGTATaactttgatttatagtcaggt < 2:3935035‑M1/48‑22 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATagctttgatttatagtcaggt < 2:4135767‑M1/50‑22 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt < 1:2475158‑M1/50‑22 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg > 2:4302184‑M1/1‑28 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg > 2:4437449‑M1/1‑28 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg < 1:4541340‑M1/50‑23 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg < 2:3060260‑M1/50‑23 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg > 2:1588820‑M1/1‑26 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg > 2:172718‑M1/1‑26 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct < 1:3103076‑M1/50‑28 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct > 2:2196522‑M1/1‑23 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct < 1:158117‑M1/50‑28 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct < 1:5178426‑M1/50‑28 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg < 2:4283380‑M1/48‑26 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt < 2:1884373‑M1/50‑31 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt < 2:2174164‑M1/50‑31 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt < 1:3080161‑M1/50‑31 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt < 2:794194‑M1/50‑31 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt < 1:3930192‑M1/50‑31 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttt < 2:2880794‑M1/49‑30 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtaaggtggggctttt < 1:3827419‑M1/50‑31 (MQ=255) tgtTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGaaa < 1:2209925/50‑1 (MQ=255) gtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc > 1:2499772‑M1/1‑19 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct > 2:1413009‑M1/1‑18 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc < 2:1738039‑M1/49‑32 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc < 2:4648213‑M1/49‑32 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc < 2:309125‑M1/49‑34 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 2:3834007‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 2:945073‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct < 2:1041250‑M1/49‑35 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt < 2:182305‑M1/50‑37 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt > 1:3122733‑M1/1‑14 (MQ=255) ttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtc > 1:400054‑M1/1‑13 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:710462‑M1/49‑39 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc > 2:172878‑M1/1‑10 (MQ=255) aaCGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGccc > 2:2451617/1‑50 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcct < 1:5154377‑M1/50‑43 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt < 2:4910753‑M1/50‑45 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc < 2:3424138‑M1/50‑46 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc > 2:2081621‑M1/1‑5 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc < 1:2823179‑M1/50‑46 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg < 1:689513‑M1/50‑47 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg < 1:1350929‑M1/50‑47 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg < 1:2832799‑M1/50‑47 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg > 2:4102567‑M1/1‑4 (MQ=255) gTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat < 1:1020312/50‑1 (MQ=255) tataactttgatttatagtcaggtggggcttttctctgtctgcctttcgg < 2:2290291‑M1/50‑48 (MQ=255) ataactttgatttatagtcaggtggggcttttctctgtctgcctttcggt > 1:214775‑M1/1‑2 (MQ=255) taactttgatttatagtcaggtcgggcttttctctgtctgcctttcggt > 2:3447998‑M1/1‑1 (MQ=255) tGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAatat < 1:1528903/49‑1 (MQ=255) | CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |