| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 9 (0.080) | 104 (0.950) | 54/98 | 0.2 | 90.4% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 13 (0.120) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 118 total aligned reads displayed.
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722028‑3722124 | tatatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa > 1:2848026‑M2/49‑50 (MQ=255) atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 2:836571‑M2/48‑50 (MQ=255) atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 2:1691270‑M2/48‑50 (MQ=255) atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:1417451‑M2/48‑50 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa < 2:3196555‑M2/2‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt < 1:1145115‑M2/4‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt > 1:4633219‑M2/47‑50 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt > 2:361879‑M2/46‑50 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt > 1:4583899‑M2/46‑50 (MQ=255) tttctgcgcattcccagcggcctgtgttgatttccaacgagtatAACtt < 2:2393615‑M2/5‑1 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:2596080‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt < 1:122343‑M2/5‑1 (MQ=255) ttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:3992667‑M2/44‑49 (MQ=255) ttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:2677181‑M2/44‑49 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 2:3559026‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 2:1682552‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 2:1936780‑M2/7‑1 (MQ=255) gcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt > 1:738591‑M2/40‑49 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:3609786‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:3629019‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt < 1:341484‑M2/10‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta < 1:3908406‑M2/12‑1 (MQ=255) ccTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGAttt < 1:5053576/49‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtat < 2:4082555‑M2/13‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:2871657‑M2/38‑49 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:1852891‑M2/38‑49 (MQ=255) cTCGTGTTTAACTGTCCAGCTTTTTGGGGTCAGTACAAACTTTGATTtat < 2:4380909/50‑1 (MQ=255) cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTtat < 2:2058577/50‑1 (MQ=255) cattcctagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 2:3723467‑M2/37‑48 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:1550428‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:4152316‑M2/37‑48 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:429376‑M2/37‑48 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:3227979‑M2/37‑48 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:3854944‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg > 2:1183853‑M2/36‑50 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:618614‑M2/15‑1 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:865251‑M2/35‑50 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt < 1:2600571‑M2/16‑1 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 2:767132‑M2/35‑50 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt < 2:3011929‑M2/16‑1 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt > 1:3859680‑M2/35‑50 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt < 1:3933109‑M2/16‑1 (MQ=255) gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTtata < 2:760469/48‑1 (MQ=255) tttAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCa < 1:14776/49‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCa < 1:15069‑M2/18‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCa < 2:2580005‑M2/18‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg < 1:536476‑M2/19‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg > 2:1760704‑M2/32‑50 (MQ=255) ttAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAgg > 2:1054388/1‑50 (MQ=255) cagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAgg > 2:5137984‑M2/31‑50 (MQ=255) tAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAgg < 2:1560308/49‑1 (MQ=255) agcctcctgtgttgatttccaacgagtatAGCTTTGATTTATAGTCAGGt < 2:4135767‑M2/21‑1 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg > 2:4302184‑M2/29‑50 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg < 1:4541340‑M2/22‑1 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg < 2:3060260‑M2/22‑1 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg > 2:4437449‑M2/29‑50 (MQ=255) ctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTggg > 2:172718‑M2/27‑50 (MQ=255) tCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTgggg < 1:1132472/48‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg < 1:3453295‑M2/25‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg < 2:4283380‑M2/25‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt < 1:3103076‑M2/27‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt > 2:2196522‑M2/24‑50 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt < 1:158117‑M2/27‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt < 1:5178426‑M2/27‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 1:3930192‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 2:794194‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 2:2174164‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 2:1884373‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 1:3080161‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCttt < 2:2880794‑M2/29‑1 (MQ=255) gttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc > 1:2499772‑M2/20‑50 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct > 2:1413009‑M2/19‑50 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc < 2:1738039‑M2/31‑1 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc < 2:1026786‑M2/31‑1 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc < 2:4648213‑M2/31‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc < 2:309125‑M2/33‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg < 2:3834007‑M2/35‑1 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt < 2:182305‑M2/36‑1 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt > 1:3122733‑M2/15‑50 (MQ=255) ttGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg < 1:1563781/49‑1 (MQ=255) ttGGGGTCAGTACAAACTTTGATTTATAGGCAGGTGGGGCTTTTCtctg < 2:585525/49‑1 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct < 1:710462‑M2/38‑1 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGc > 2:172878‑M2/11‑50 (MQ=255) tCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt < 1:571303/50‑1 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt < 1:5154377‑M2/42‑1 (MQ=255) gagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCttt > 1:2564885‑M2/7‑50 (MQ=255) gagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCttt < 2:4910753‑M2/44‑1 (MQ=255) aGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCttt > 2:1313111/1‑50 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 2:3424138‑M2/45‑1 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 2:4667366‑M2/45‑1 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc > 2:2081621‑M2/6‑50 (MQ=255) agtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTc < 2:2503233‑M2/45‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg < 1:689513‑M2/46‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg < 1:1350929‑M2/46‑1 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg > 2:4102567‑M2/5‑50 (MQ=255) gtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCg < 1:2832799‑M2/46‑1 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg < 2:2290291‑M2/47‑1 (MQ=255) atAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:214775‑M2/3‑50 (MQ=255) tAACTTTGATTTATAGTCAGGTCGGGCTTTTCTCTGTCTGCCTTTCGGt > 2:3447998‑M2/2‑49 (MQ=255) aaCTTTGATTTTTAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTg > 2:1319248/1‑49 (MQ=255) | GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722028‑3722124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |