| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 10 (0.090) | 132 (1.230) | 65/96 | 0.0 | 91.7% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 14 (0.130) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 136 total aligned reads displayed.
CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 GACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCT > 1:1498348/1‑50 ACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCT > 1:2185588/1‑49 ACGAGTTTCATGCCGAGTCCTTTGTGCGAGCAAAAATATCAGTATGGCTC < 2:5336023/50‑1 CGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCA < 1:1058958/50‑1 CGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCA < 1:134958/50‑1 CGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTC > 2:3095664/1‑49 CGAGTTTCATGCCGAGTCCTTGGTGCGAGGAAAAATATCAGTATGGCTCA < 2:403038/50‑1 AGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAAT > 2:1932024/1‑50 GTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATG < 2:683912/50‑1 GTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATG < 2:1383413/50‑1 GTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATG < 1:2938644/50‑1 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA > 2:2306521/1‑50 TTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGAT > 1:3704418/1‑50 CATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATC > 2:1195829/1‑49 CATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATC < 1:4866803/49‑1 ATGCCGAGTCCTTTGTGCGAGGCAACATCTCAGTATGGCTCAATGACCC > 2:2960811/1‑49 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC > 2:1371119/1‑49 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC > 2:3904240/1‑49 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC > 1:4109361/1‑49 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC > 2:939560/1‑49 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGAGCC < 2:3915110/49‑1 TGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAA < 1:1743784/50‑1 TGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAA < 2:2372295/50‑1 TGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCA > 1:4773883/1‑49 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT < 1:933008/50‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT < 2:2583257/50‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAA < 1:910284/49‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 2:5119843/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 2:417305/50‑1 GAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 2:351819/1‑49 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 2:258971/50‑1 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 1:3317072/1‑48 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 2:4975546/1‑48 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 2:441912/1‑48 GTCATTTGTGCGAGGAAAAATATCAGTATGGCACAATGATCCAAATAAAG < 2:3182174/50‑1 TCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA < 1:1322533/50‑1 TCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA < 1:5316704/50‑1 TCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA < 1:991520/50‑1 TCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 1:3003734/1‑46 CCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA > 2:1524123/1‑49 CCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGA > 2:4074381/1‑49 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT < 2:4156761/49‑1 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT < 1:3617576/49‑1 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT > 1:2200213/1‑49 CTTTGTGCGAAGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT < 2:4990350/49‑1 TTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA > 2:4785641/1‑50 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 1:4249307/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 2:1895134/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 2:1574543/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGAACCGAATAAGGAGAA < 2:252392/48‑1 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCA < 2:983237/50‑1 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCA < 2:2796510/50‑1 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGC < 1:716821/49‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 2:2053224/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 1:1338029/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 2:2113137/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:4146137/1‑48 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 2:4137870/50‑1 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG > 2:4763464/1‑50 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG > 2:58258/1‑50 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 1:105439/50‑1 GAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGC > 1:73070/1‑50 AAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCT < 1:66872/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:1104153/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG > 1:4691579/1‑50 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:1579388/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG > 1:4997668/1‑50 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:294524/50‑1 AAATATCAGTATGGCTCAATGCTCCAAATAAAGATAATGCATCCAGCTGG > 2:4440717/1‑50 AAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGG > 1:4439034/1‑50 AAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGG > 1:1470218/1‑50 AAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGG > 2:891866/1‑50 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTC < 1:4163998/50‑1 TATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCA > 1:2226777/1‑50 ATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT > 2:4042544/1‑50 ATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT > 1:5106513/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT > 2:788883/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT > 2:2094580/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT > 2:24328/1‑50 TCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATT < 1:3870175/50‑1 CAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC > 2:4429225/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:3872068/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:2097036/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC < 2:1877781/49‑1 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC < 2:2424414/49‑1 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTT < 2:619863/50‑1 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 2:2307783/1‑49 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 2:1195169/1‑49 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTA < 1:4969880/50‑1 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTA < 1:199420/50‑1 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:1655619/1‑48 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGC < 2:1491162/50‑1 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 2:3096047/1‑49 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 2:3459862/1‑49 GGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 2:2983738/1‑48 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:2110074/1‑50 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCA < 2:3845597/49‑1 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCA < 1:4655263/49‑1 GCTCAATGATCCAAATAAAGATAATGCATCCAGCCGGTCATTCTTAGCA < 1:5139238/49‑1 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 2:1084448/1‑49 CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |