| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 10 (0.090) | 132 (1.230) | 65/96 | 0.0 | 91.7% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 14 (0.130) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 146 total aligned reads displayed.
CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAA > NC_000913/3761943‑3762041 | cgacgaGTTTCATGCCGAGCACTTTGTGCGAGGAAAAATATCAGTATGGC < 2:4125586‑M1/50‑1 (MQ=255) acgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCt > 1:2185588‑M1/1‑48 (MQ=255) acgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCt < 1:5157851/50‑1 (MQ=255) acgaGTTTCATGCCGAGTCCTTTGTGCGAGCAAAAATATCAGTATGGCtc < 2:5336023‑M1/50‑3 (MQ=255) cgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtca < 1:1058958‑M1/50‑4 (MQ=255) cgaGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtc > 2:3095664‑M1/1‑47 (MQ=255) cgaGTTTCATGCCGAGTCCTTGGTGCGAGGAAAAATATCAGTATGGCtca < 2:403038‑M1/50‑4 (MQ=255) aGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaat > 2:1932024‑M1/1‑45 (MQ=255) gTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatg < 1:2938644‑M1/50‑7 (MQ=255) tttCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatga > 2:2306521‑M1/1‑43 (MQ=255) ttCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgat > 1:3704418‑M1/1‑42 (MQ=255) cATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatc < 1:4866803‑M1/49‑10 (MQ=255) cATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatc < 1:2174452‑M1/49‑10 (MQ=255) cATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCTGGTGATgg > 2:3737187/1‑50 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGCAACATCTCAGTATGGCtcaatgaccc > 2:2960811‑M1/1‑39 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcc > 2:1371119‑M1/1‑39 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcc > 2:3904240‑M1/1‑39 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcc > 2:939560‑M1/1‑39 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatcc < 1:5345737‑M1/49‑11 (MQ=255) aTGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgagcc < 2:3915110‑M1/49‑11 (MQ=255) ccGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaat < 1:933008‑M1/50‑15 (MQ=255) ccGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaat < 2:2583257‑M1/50‑15 (MQ=255) cGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata < 2:417305‑M1/50‑16 (MQ=255) gAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 2:351819‑M1/1‑34 (MQ=255) aGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 2:3519869‑M1/1‑33 (MQ=255) aGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 2:4975546‑M1/1‑33 (MQ=255) aGTCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 2:441912‑M1/1‑33 (MQ=255) tCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaaga < 1:991520‑M1/50‑20 (MQ=255) tCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaaga < 1:1322533‑M1/50‑20 (MQ=255) tCCTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaata > 1:3003734‑M1/1‑31 (MQ=255) ccTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaaga > 2:1524123‑M1/1‑30 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagata < 1:5108635‑M1/50‑22 (MQ=255) cTTTGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagat < 1:3617576‑M1/49‑21 (MQ=255) cTTTGTGCGAAGAAAAATATCAGTATGGCtcaatgatccaaataaagat < 2:4990350‑M1/49‑21 (MQ=255) tttGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataa > 1:2875513‑M1/1‑28 (MQ=255) tttGTGCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataa > 2:4785641‑M1/1‑28 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataat < 1:4249307‑M1/49‑24 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataa < 2:1357929‑M1/48‑23 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaatgaaccgaataaggagaa < 2:252392‑M1/48‑23 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCtcaaggatccaaataaagataat < 2:1823769‑M1/49‑24 (MQ=255) tgtgCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGa > 1:1579688/1‑49 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca < 2:2796510‑M1/50‑27 (MQ=255) tgCGAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgca < 2:983237‑M1/50‑27 (MQ=255) tgCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGaaaa > 1:165493/1‑50 (MQ=255) gAGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc > 2:2661882‑M1/1‑21 (MQ=255) aGGACAAATATCAGTATGGCtcattgatccaaataaaggtaatgcatcc > 2:3312165‑M1/1‑20 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 1:1338029‑M1/50‑31 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 1:4875409‑M1/50‑31 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatcca < 2:2113137‑M1/50‑31 (MQ=255) aGGAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatc > 1:4146137‑M1/1‑20 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag < 1:105439‑M1/50‑32 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag > 2:518467‑M1/1‑19 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag > 2:4763464‑M1/1‑19 (MQ=255) ggAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccag < 2:4137870‑M1/50‑32 (MQ=255) gAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccagc > 1:73070‑M1/1‑18 (MQ=255) gAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccagc < 1:4661018‑M1/50‑33 (MQ=255) gAAAAATATCAGTATGGCtcaatgatccaaataaagataatgcatccagc > 1:897726‑M1/1‑18 (MQ=255) aaaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagct < 1:66872‑M1/50‑34 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg > 1:4691579‑M1/1‑16 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:1104153‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg < 1:1579388‑M1/50‑35 (MQ=255) aaaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctg > 1:4997668‑M1/1‑16 (MQ=255) aaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctgg > 2:891866‑M1/1‑15 (MQ=255) aaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctgg > 1:1470218‑M1/1‑15 (MQ=255) aaaTATCAGTATGGCtcaatgatccaaataaagataatgcatccagctgg > 1:4439034‑M1/1‑15 (MQ=255) aaTATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGt > 1:2496440/1‑50 (MQ=255) atatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtc < 1:4163998‑M1/50‑38 (MQ=255) tatCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtca > 1:2226777‑M1/1‑12 (MQ=255) atCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcat > 2:4042544‑M1/1‑11 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt > 2:2094580‑M1/1‑10 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt > 2:788883‑M1/1‑10 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt < 1:3870175‑M1/50‑41 (MQ=255) tCAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcatt > 2:24328‑M1/1‑10 (MQ=255) cAGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattc > 2:4429225‑M1/1‑9 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct < 2:1403038‑M1/50‑43 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 2:4512240‑M1/1‑8 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:3872068‑M1/1‑8 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:2097036‑M1/1‑8 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattc < 2:2424414‑M1/49‑42 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattc < 1:204696‑M1/49‑42 (MQ=255) aGTATGGCtcaatgatccaaataaagataatgcatccagctggtcattc < 2:1877781‑M1/49‑42 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattctt < 2:619863‑M1/50‑44 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 2:636969‑M1/1‑7 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 2:2307783‑M1/1‑7 (MQ=255) gTATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 2:1195169‑M1/1‑7 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattctta < 1:199420‑M1/50‑45 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattctta < 1:4969880‑M1/50‑45 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 1:1655619‑M1/1‑6 (MQ=255) tATGGCtcaatgatccaaataaagataatgcatccagctggtcattct > 2:4323780‑M1/1‑6 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttagc < 2:1491162‑M1/50‑47 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 2:2412281‑M1/1‑4 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 2:3459862‑M1/1‑4 (MQ=255) tGGCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 2:3096047‑M1/1‑4 (MQ=255) ggCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 2:2983738‑M1/1‑3 (MQ=255) ggCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 1:3168661‑M1/1‑3 (MQ=255) ggCtcaatgatccaaataaagataatgcatccagctggtcattcttag > 2:1944688‑M1/1‑3 (MQ=255) gCtcaatgatccaaataaagataatgcatccagctggtcattcttagcag > 1:3944238‑M1/1‑2 (MQ=255) gCtcaatgatccaaataaagataatgcatccagccggtcattcttagca < 1:5139238‑M1/49‑48 (MQ=255) ctcaatgatccaaataaagataatgcatccagctggtcattcttagcagc < 1:1388081‑M1/50‑50 (MQ=255) ctcaatgatccaaataaagataatgcatccagctggtcattcttagcag > 2:1084448‑M1/1‑1 (MQ=255) | CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCCTGGTGATGGGAAAAAGGGCAGAAAATGTTGATGGTTTGTTACTTCCAA > NC_000913/3761943‑3762041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |